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2F69
Biol. Unit 1
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Asym.Unit (109 KB)
Biol.Unit 1 (103 KB)
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(1)
Title
:
TERNARY COMPLEX OF SET7/9 BOUND TO ADOHCY AND A TAF10 PEPTIDE
Authors
:
J. -F. Couture, E. Collazo, G. Hauk, R. C. Trievel
Date
:
28 Nov 05 (Deposition) - 17 Jan 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Set Domain, Protein Lysine Methyltransferase, Enzyme- Peptide-Adohcy Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. -F. Couture, E. Collazo, G. Hauk, R. C. Trievel
Structural Basis For The Methylation Site Specificity Of Set7/9
Nat. Struct. Mol. Biol. V. 13 140 2006
(for further references see the
PDB file header
)
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: N-METHYL-LYSINE (MLZa)
3a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
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No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
MLZ
1
Mod. Amino Acid
N-METHYL-LYSINE
3
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:226 , GLU A:228 , GLY A:264 , ASN A:265 , HIS A:293 , LYS A:294 , ASN A:296 , HIS A:297 , TYR A:335 , TRP A:352 , GLU A:356 , HOH A:819 , HOH A:828 , HOH A:862 , HOH A:930 , HOH A:936 , HOH A:977 , HOH A:991 , HOH A:1017 , HOH A:1142 , MLZ B:189
BINDING SITE FOR RESIDUE SAH A 800
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: SET (A:214-336)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SET
PS50280
SET domain profile.
SETD7_HUMAN
214-336
1
A:214-336
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2f69a2 (A:194-364)
2a: SCOP_d2f69a1 (A:116-193)
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Class
:
All beta proteins
(24004)
Fold
:
beta-clip
(280)
Superfamily
:
SET domain
(44)
Family
:
Histone lysine methyltransferases
(21)
Protein domain
:
Histone H3 K4-specific methyltransferase SET7/9 catalytic domain
(17)
Human (Homo sapiens) [TaxId: 9606]
(17)
1a
d2f69a2
A:194-364
Fold
:
open-sided beta-meander
(34)
Superfamily
:
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
(17)
Family
:
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
(17)
Protein domain
:
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
(17)
Human (Homo sapiens) [TaxId: 9606]
(17)
2a
d2f69a1
A:116-193
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2f69A02 (A:194-336)
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Complex
(381)
Topology
:
Beta-clip-like
(18)
Homologous Superfamily
:
SET domain
(18)
Human (Homo sapiens)
(13)
1a
2f69A02
A:194-336
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (109 KB)
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