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2F60
Asym. Unit
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Asym.Unit (17 KB)
Biol.Unit 1 (13 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE DIHYDROLIPOAMIDE DEHYDROGENASE (E3)-BINDING DOMAIN OF HUMAN E3-BINDING PROTEIN
Authors
:
C. A. Brautigam, J. L. Chuang, R. M. Wynn, D. R. Tomchick, M. Machius, D. T
Date
:
28 Nov 05 (Deposition) - 17 Jan 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : K
Biol. Unit 1: K (1x)
Keywords
:
Protein-Binding Protein, E3Bd, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. A. Brautigam, R. M. Wynn, J. L. Chuang, M. Machius, D. R. Tomchick, D. T. Chuang
Structural Insight Into Interactions Between Dihydrolipoamide Dehydrogenase (E3) And E3 Binding Protein Of Human Pyruvate Dehydrogenase Complex.
Structure V. 14 611 2006
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
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Label:
No.
Name
Count
Type
Full Name
1
GOL
2
Ligand/Ion
GLYCEROL
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH K:28 , LYS K:141 , HIS K:142 , LEU K:164
BINDING SITE FOR RESIDUE GOL K 101
2
AC2
SOFTWARE
HOH K:16 , GLY K:125 , THR K:126 , LEU K:127 , ARG K:128
BINDING SITE FOR RESIDUE GOL K 102
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PSBD (K:130-167)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PSBD
PS51826
Peripheral subunit-binding (PSBD) domain profile.
ODPX_HUMAN
183-220
1
K:130-167
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Exons
(3, 3)
Info
All Exons
Exon 1.6 (K:121-128)
Exon 1.7c (K:128-161)
Exon 1.8 (K:161-180)
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7c
3: Boundary 1.7c/1.8
4: Boundary 1.8/1.9
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000227868
3a
ENSE00000824440
chr11:
34938119-34938362
244
ODPX_HUMAN
1-54
54
0
-
-
1.4
ENST00000227868
4
ENSE00000710349
chr11:
34952951-34953031
81
ODPX_HUMAN
54-81
28
0
-
-
1.5
ENST00000227868
5
ENSE00001150239
chr11:
34969053-34969153
101
ODPX_HUMAN
81-114
34
0
-
-
1.6
ENST00000227868
6
ENSE00001150231
chr11:
34978931-34979130
200
ODPX_HUMAN
115-181
67
1
K:121-128
8
1.7c
ENST00000227868
7c
ENSE00001150226
chr11:
34981967-34982065
99
ODPX_HUMAN
181-214
34
1
K:128-161
34
1.8
ENST00000227868
8
ENSE00001150220
chr11:
34988187-34988361
175
ODPX_HUMAN
214-272
59
1
K:161-180
20
1.9
ENST00000227868
9
ENSE00001330369
chr11:
34991686-34991833
148
ODPX_HUMAN
273-322
50
0
-
-
1.11b
ENST00000227868
11b
ENSE00000710371
chr11:
34999671-34999729
59
ODPX_HUMAN
322-341
20
0
-
-
1.12a
ENST00000227868
12a
ENSE00000710373
chr11:
35006117-35006275
159
ODPX_HUMAN
342-394
53
0
-
-
1.13
ENST00000227868
13
ENSE00000710375
chr11:
35013862-35013926
65
ODPX_HUMAN
395-416
22
0
-
-
1.14c
ENST00000227868
14c
ENSE00002154149
chr11:
35016461-35017518
1058
ODPX_HUMAN
416-501
86
0
-
-
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain K
Asymmetric Unit 1
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Asym.Unit (17 KB)
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