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2F5Z
Asym. Unit
Info
Asym.Unit (825 KB)
Biol.Unit 1 (167 KB)
Biol.Unit 2 (175 KB)
Biol.Unit 3 (175 KB)
Biol.Unit 4 (178 KB)
Biol.Unit 5 (171 KB)
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Title
:
CRYSTAL STRUCTURE OF HUMAN DIHYDROLIPOAMIDE DEHYDROGENASE (E3) COMPLEXED TO THE E3-BINDING DOMAIN OF HUMAN E3-BINDING PROTEIN
Authors
:
C. A. Brautigam, J. L. Chuang, R. M. Wynn, D. R. Tomchick, M. Machius, D. T. Chuang
Date
:
28 Nov 05 (Deposition) - 17 Jan 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.18
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
Biol. Unit 1: A,B,K (1x)
Biol. Unit 2: C,D,L (1x)
Biol. Unit 3: E,F,M (1x)
Biol. Unit 4: G,H,N (1x)
Biol. Unit 5: I,J,O (1x)
Keywords
:
Protein-Protein Complex, Oxidoreductase/Protein Binding Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. A. Brautigam, R. M. Wynn, J. L. Chuang, M. Machius, D. R. Tomchick, D. T. Chuang
Structural Insight Into Interactions Between Dihydrolipoamide Dehydrogenase (E3) And E3 Binding Protein Of Human Pyruvate Dehydrogenase Complex.
Structure V. 14 611 2006
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 49)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
1c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
1d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
1e: FLAVIN-ADENINE DINUCLEOTIDE (FADe)
1f: FLAVIN-ADENINE DINUCLEOTIDE (FADf)
1g: FLAVIN-ADENINE DINUCLEOTIDE (FADg)
1h: FLAVIN-ADENINE DINUCLEOTIDE (FADh)
1i: FLAVIN-ADENINE DINUCLEOTIDE (FADi)
1j: FLAVIN-ADENINE DINUCLEOTIDE (FADj)
2a: SULFATE ION (SO4a)
2aa: SULFATE ION (SO4aa)
2ab: SULFATE ION (SO4ab)
2ac: SULFATE ION (SO4ac)
2ad: SULFATE ION (SO4ad)
2ae: SULFATE ION (SO4ae)
2af: SULFATE ION (SO4af)
2ag: SULFATE ION (SO4ag)
2ah: SULFATE ION (SO4ah)
2ai: SULFATE ION (SO4ai)
2aj: SULFATE ION (SO4aj)
2ak: SULFATE ION (SO4ak)
2al: SULFATE ION (SO4al)
2am: SULFATE ION (SO4am)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
2k: SULFATE ION (SO4k)
2l: SULFATE ION (SO4l)
2m: SULFATE ION (SO4m)
2n: SULFATE ION (SO4n)
2o: SULFATE ION (SO4o)
2p: SULFATE ION (SO4p)
2q: SULFATE ION (SO4q)
2r: SULFATE ION (SO4r)
2s: SULFATE ION (SO4s)
2t: SULFATE ION (SO4t)
2u: SULFATE ION (SO4u)
2v: SULFATE ION (SO4v)
2w: SULFATE ION (SO4w)
2x: SULFATE ION (SO4x)
2y: SULFATE ION (SO4y)
2z: SULFATE ION (SO4z)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
10
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
SO4
39
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(49, 49)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:299 , ARG A:301 , ALA A:323 , GLY A:324
BINDING SITE FOR RESIDUE SO4 A 2482
02
AC2
SOFTWARE
ARG C:299 , ARG C:301 , ALA C:323 , GLY C:324 , HOH C:2594 , HOH C:2601
BINDING SITE FOR RESIDUE SO4 C 2490
03
AC3
SOFTWARE
HIS A:64 , GLY A:68 , THR A:69 , HOH A:2498
BINDING SITE FOR RESIDUE SO4 A 2483
04
AC4
SOFTWARE
HIS C:64 , GLY C:68 , THR C:69 , ASP C:70 , HOH C:2543
BINDING SITE FOR RESIDUE SO4 C 2491
05
AC5
SOFTWARE
LEU A:210 , GLY A:211 , HIS A:212
BINDING SITE FOR RESIDUE SO4 A 2484
06
AC6
SOFTWARE
LEU C:210 , GLY C:211 , HIS C:212
BINDING SITE FOR RESIDUE SO4 C 2492
07
AC7
SOFTWARE
ASN A:286 , LEU A:287 , GLY A:288 , LEU A:289 , GLU A:290 , GLU A:291
BINDING SITE FOR RESIDUE SO4 A 2485
08
AC8
SOFTWARE
ASN C:286 , LEU C:287 , GLY C:288 , LEU C:289 , GLU C:290 , GLU C:291
BINDING SITE FOR RESIDUE SO4 C 2493
09
AC9
SOFTWARE
ARG B:299 , ARG B:301 , ALA B:323 , GLY B:324
BINDING SITE FOR RESIDUE SO4 B 2486
10
BC1
SOFTWARE
HOH A:2597 , ARG D:299 , ARG D:301 , ALA D:323 , GLY D:324 , HOH D:2571
BINDING SITE FOR RESIDUE SO4 D 2494
11
BC2
SOFTWARE
HIS B:64 , THR B:69 , HOH B:2491
BINDING SITE FOR RESIDUE SO4 B 2487
12
BC3
SOFTWARE
HIS D:64 , GLY D:68 , THR D:69
BINDING SITE FOR RESIDUE SO4 D 2495
13
BC4
SOFTWARE
GLY B:211 , HIS B:212
BINDING SITE FOR RESIDUE SO4 B 2488
14
BC5
SOFTWARE
LEU D:210 , GLY D:211 , HIS D:212
BINDING SITE FOR RESIDUE SO4 D 2496
15
BC6
SOFTWARE
THR B:284 , ASN B:286 , LEU B:287 , GLY B:288 , LEU B:289 , GLU B:290
BINDING SITE FOR RESIDUE SO4 B 2489
16
BC7
SOFTWARE
THR D:284 , ASN D:286 , LEU D:287 , GLY D:288 , LEU D:289 , GLU D:290 , HOH D:2657
BINDING SITE FOR RESIDUE SO4 D 2497
17
BC8
SOFTWARE
ARG E:299 , ARG E:301 , ALA E:323 , GLY E:324
BINDING SITE FOR RESIDUE SO4 E 2498
18
BC9
SOFTWARE
HIS E:64 , GLY E:68 , THR E:69 , ASP E:70 , HOH E:2564
BINDING SITE FOR RESIDUE SO4 E 2499
19
CC1
SOFTWARE
LEU E:210 , GLY E:211 , HIS E:212
BINDING SITE FOR RESIDUE SO4 E 2500
20
CC2
SOFTWARE
THR E:284 , ASN E:286 , LEU E:287 , GLY E:288 , LEU E:289 , GLU E:290 , GLU E:291
BINDING SITE FOR RESIDUE SO4 E 2501
21
CC3
SOFTWARE
ARG F:299 , ARG F:301 , ALA F:323 , GLY F:324 , HOH F:2717 , HOH F:2718 , HOH H:2698
BINDING SITE FOR RESIDUE SO4 F 2502
22
CC4
SOFTWARE
HIS F:64 , GLY F:68 , THR F:69 , HOH F:2507 , HOH F:2686
BINDING SITE FOR RESIDUE SO4 F 2503
23
CC5
SOFTWARE
GLY F:211 , HIS F:212
BINDING SITE FOR RESIDUE SO4 F 2504
24
CC6
SOFTWARE
THR F:284 , ASN F:286 , LEU F:287 , GLY F:288 , LEU F:289 , GLU F:290 , HOH F:2681
BINDING SITE FOR RESIDUE SO4 F 2505
25
CC7
SOFTWARE
ARG G:299 , ARG G:301 , ALA G:323 , GLY G:324
BINDING SITE FOR RESIDUE SO4 G 2506
26
CC8
SOFTWARE
HIS G:64 , GLY G:68 , THR G:69 , HOH G:2521 , HOH G:2682
BINDING SITE FOR RESIDUE SO4 G 2507
27
CC9
SOFTWARE
LEU G:210 , GLY G:211 , HIS G:212
BINDING SITE FOR RESIDUE SO4 G 2508
28
DC1
SOFTWARE
THR G:284 , ASN G:286 , LEU G:287 , GLY G:288 , LEU G:289 , GLU G:290 , GLU G:291
BINDING SITE FOR RESIDUE SO4 G 2509
29
DC2
SOFTWARE
ARG H:299 , ARG H:301 , ALA H:323 , GLY H:324
BINDING SITE FOR RESIDUE SO4 H 2510
30
DC3
SOFTWARE
HIS H:64 , GLY H:68 , THR H:69 , HOH H:2604
BINDING SITE FOR RESIDUE SO4 H 2511
31
DC4
SOFTWARE
LEU H:210 , GLY H:211 , HIS H:212 , HOH H:2784
BINDING SITE FOR RESIDUE SO4 H 2512
32
DC5
SOFTWARE
THR H:284 , ASN H:286 , LEU H:287 , GLY H:288 , LEU H:289 , GLU H:290 , HOH H:2622 , HOH H:2736
BINDING SITE FOR RESIDUE SO4 H 2513
33
DC6
SOFTWARE
LYS G:253 , ARG I:299 , ARG I:301 , ALA I:323 , GLY I:324
BINDING SITE FOR RESIDUE SO4 I 2514
34
DC7
SOFTWARE
LEU I:210 , GLY I:211 , HIS I:212
BINDING SITE FOR RESIDUE SO4 I 2515
35
DC8
SOFTWARE
THR I:284 , ASN I:286 , LEU I:287 , GLY I:288 , LEU I:289 , GLU I:290
BINDING SITE FOR RESIDUE SO4 I 2516
36
DC9
SOFTWARE
HOH B:2497 , ARG J:299 , ARG J:301 , ALA J:323 , GLY J:324
BINDING SITE FOR RESIDUE SO4 J 2517
37
EC1
SOFTWARE
HIS J:64 , THR J:69
BINDING SITE FOR RESIDUE SO4 J 2518
38
EC2
SOFTWARE
LEU J:210 , GLY J:211 , HIS J:212
BINDING SITE FOR RESIDUE SO4 J 2519
39
EC3
SOFTWARE
THR J:284 , ASN J:286 , LEU J:287 , GLY J:288 , LEU J:289 , GLU J:290
BINDING SITE FOR RESIDUE SO4 J 2520
40
EC4
SOFTWARE
ILE A:12 , GLY A:13 , GLY A:15 , PRO A:16 , GLY A:17 , GLU A:36 , LYS A:37 , ASN A:38 , GLY A:43 , THR A:44 , CYS A:45 , VAL A:48 , GLY A:49 , CYS A:50 , LYS A:54 , GLY A:117 , TYR A:118 , GLY A:119 , ALA A:147 , THR A:148 , GLY A:149 , SER A:150 , SER A:168 , ILE A:189 , ARG A:280 , PHE A:283 , GLY A:319 , ASP A:320 , MET A:326 , LEU A:327 , ALA A:328 , HIS A:329 , TYR A:359 , HOH A:2491 , HOH A:2502 , HOH A:2507 , HOH A:2525 , HIS B:452
BINDING SITE FOR RESIDUE FAD A 480
41
EC5
SOFTWARE
HIS A:452 , ILE B:12 , GLY B:13 , GLY B:15 , PRO B:16 , GLY B:17 , GLU B:36 , LYS B:37 , ASN B:38 , GLY B:43 , THR B:44 , CYS B:45 , VAL B:48 , GLY B:49 , CYS B:50 , SER B:53 , LYS B:54 , GLY B:117 , TYR B:118 , GLY B:119 , ALA B:147 , THR B:148 , GLY B:149 , SER B:150 , SER B:168 , ILE B:189 , ARG B:280 , GLY B:319 , ASP B:320 , MET B:326 , LEU B:327 , ALA B:328 , HIS B:329 , ALA B:331 , TYR B:359 , HOH B:2496 , HOH B:2514 , HOH B:2545
BINDING SITE FOR RESIDUE FAD B 480
42
EC6
SOFTWARE
GLY C:13 , SER C:14 , GLY C:15 , PRO C:16 , GLY C:17 , GLU C:36 , LYS C:37 , ASN C:38 , GLY C:43 , THR C:44 , CYS C:45 , VAL C:48 , GLY C:49 , CYS C:50 , SER C:53 , LYS C:54 , GLY C:117 , TYR C:118 , GLY C:119 , ALA C:147 , THR C:148 , GLY C:149 , SER C:150 , ILE C:189 , ARG C:280 , PHE C:283 , GLY C:319 , ASP C:320 , MET C:326 , LEU C:327 , ALA C:328 , HIS C:329 , TYR C:359 , HOH C:2496 , HOH C:2497 , HOH C:2502 , HOH C:2524 , HOH C:2602 , HIS D:452
BINDING SITE FOR RESIDUE FAD C 480
43
EC7
SOFTWARE
HIS C:452 , ILE D:12 , GLY D:13 , SER D:14 , GLY D:15 , PRO D:16 , GLY D:17 , GLU D:36 , LYS D:37 , ASN D:38 , GLY D:43 , THR D:44 , CYS D:45 , VAL D:48 , GLY D:49 , CYS D:50 , SER D:53 , LYS D:54 , GLY D:117 , TYR D:118 , GLY D:119 , ALA D:147 , THR D:148 , GLY D:149 , SER D:150 , SER D:168 , ILE D:189 , ARG D:280 , PHE D:283 , GLY D:319 , ASP D:320 , MET D:326 , LEU D:327 , ALA D:328 , HIS D:329 , ALA D:331 , TYR D:359 , HOH D:2500 , HOH D:2503 , HOH D:2557 , HOH D:2574 , HOH D:2654
BINDING SITE FOR RESIDUE FAD D 480
44
EC8
SOFTWARE
ILE E:12 , GLY E:13 , SER E:14 , GLY E:15 , PRO E:16 , GLY E:17 , GLU E:36 , LYS E:37 , ASN E:38 , GLY E:43 , THR E:44 , CYS E:45 , GLY E:49 , CYS E:50 , SER E:53 , LYS E:54 , GLY E:117 , TYR E:118 , GLY E:119 , ALA E:147 , THR E:148 , GLY E:149 , SER E:150 , SER E:168 , ILE E:189 , ARG E:280 , GLY E:319 , ASP E:320 , MET E:326 , LEU E:327 , ALA E:328 , HIS E:329 , ALA E:331 , TYR E:359 , HOH E:2502 , HOH E:2505 , HOH E:2515 , HOH E:2522 , HOH E:2536 , HOH E:2600 , HIS F:452
BINDING SITE FOR RESIDUE FAD E 480
45
EC9
SOFTWARE
HIS E:452 , GLY F:13 , SER F:14 , GLY F:15 , PRO F:16 , GLY F:17 , ILE F:35 , GLU F:36 , LYS F:37 , ASN F:38 , GLY F:43 , THR F:44 , CYS F:45 , VAL F:48 , GLY F:49 , CYS F:50 , LYS F:54 , GLY F:117 , TYR F:118 , GLY F:119 , ALA F:147 , THR F:148 , GLY F:149 , SER F:150 , ILE F:189 , ARG F:280 , PHE F:283 , GLY F:319 , ASP F:320 , MET F:326 , LEU F:327 , ALA F:328 , HIS F:329 , TYR F:359 , HOH F:2512 , HOH F:2517 , HOH F:2532 , HOH F:2535 , HOH F:2650
BINDING SITE FOR RESIDUE FAD F 480
46
FC1
SOFTWARE
ILE G:12 , GLY G:13 , GLY G:15 , PRO G:16 , GLY G:17 , GLU G:36 , LYS G:37 , ASN G:38 , GLY G:43 , THR G:44 , CYS G:45 , VAL G:48 , GLY G:49 , CYS G:50 , LYS G:54 , GLY G:117 , TYR G:118 , GLY G:119 , ALA G:147 , THR G:148 , GLY G:149 , SER G:150 , SER G:168 , ARG G:280 , PHE G:283 , GLY G:319 , ASP G:320 , MET G:326 , LEU G:327 , ALA G:328 , HIS G:329 , TYR G:359 , HOH G:2522 , HOH G:2524 , HOH G:2533 , HOH G:2544 , HOH G:2631 , HIS H:452
BINDING SITE FOR RESIDUE FAD G 480
47
FC2
SOFTWARE
HIS G:452 , ILE H:12 , GLY H:13 , SER H:14 , GLY H:15 , PRO H:16 , GLY H:17 , GLU H:36 , LYS H:37 , ASN H:38 , GLY H:43 , THR H:44 , CYS H:45 , GLY H:49 , CYS H:50 , LYS H:54 , GLY H:117 , TYR H:118 , GLY H:119 , ALA H:147 , THR H:148 , GLY H:149 , SER H:150 , ARG H:280 , PHE H:283 , GLY H:319 , ASP H:320 , MET H:326 , LEU H:327 , ALA H:328 , HIS H:329 , TYR H:359 , HOH H:2515 , HOH H:2516 , HOH H:2517 , HOH H:2528 , HOH H:2545
BINDING SITE FOR RESIDUE FAD H 480
48
FC3
SOFTWARE
ILE I:12 , GLY I:13 , SER I:14 , GLY I:15 , PRO I:16 , GLY I:17 , ILE I:35 , GLU I:36 , LYS I:37 , ASN I:38 , GLY I:43 , THR I:44 , CYS I:45 , GLY I:49 , CYS I:50 , SER I:53 , LYS I:54 , GLY I:117 , TYR I:118 , GLY I:119 , ALA I:147 , THR I:148 , GLY I:149 , SER I:150 , ILE I:189 , ARG I:280 , PHE I:283 , GLY I:319 , ASP I:320 , MET I:326 , LEU I:327 , ALA I:328 , HIS I:329 , TYR I:359 , HOH I:2532 , HOH I:2533 , HOH I:2562 , HIS J:452
BINDING SITE FOR RESIDUE FAD I 480
49
FC4
SOFTWARE
HIS I:452 , ILE J:12 , GLY J:13 , SER J:14 , GLY J:15 , PRO J:16 , GLY J:17 , GLU J:36 , LYS J:37 , ASN J:38 , GLY J:43 , THR J:44 , CYS J:45 , GLY J:49 , CYS J:50 , SER J:53 , LYS J:54 , GLY J:117 , TYR J:118 , GLY J:119 , ALA J:147 , THR J:148 , GLY J:149 , SER J:150 , ILE J:189 , ARG J:280 , PHE J:283 , LEU J:287 , GLY J:319 , ASP J:320 , MET J:326 , LEU J:327 , ALA J:328 , HIS J:329 , ALA J:331 , TYR J:359 , HOH J:2521 , HOH J:2523 , HOH J:2533 , HOH J:2562 , HOH J:2608
BINDING SITE FOR RESIDUE FAD J 480
[
close Site info
]
SAPs(SNPs)/Variants
(6, 60)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_006907 (K37E, chain A/B/C/D/E/F/G/H/I/J, )
2: VAR_031922 (T69T, chain A/B/C/D/E/F/G/H/I/J, )
3: VAR_015820 (G194C, chain A/B/C/D/E/F/G/H/I/J, )
4: VAR_014555 (L296V, chain A/B/C/D/E/F/G/H/I/J, )
5: VAR_006908 (P453L, chain A/B/C/D/E/F/G/H/I/J, )
6: VAR_015821 (R460G, chain A/B/C/D/E/F/G/H/I/J, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_006907
K
72
E
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
K
37
E
2
UniProt
VAR_031922
K
104
T
DLDH_HUMAN
Polymorphism
1130477
A/B/C/D/E/F/G/H/I/J
T
69
T
3
UniProt
VAR_015820
G
229
C
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
G
194
C
4
UniProt
VAR_014555
L
331
V
DLDH_HUMAN
Polymorphism
17624
A/B/C/D/E/F/G/H/I/J
L
296
V
5
UniProt
VAR_006908
P
488
L
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
P
453
L
6
UniProt
VAR_015821
R
495
G
DLDH_HUMAN
Disease (DLDD)
---
A/B/C/D/E/F/G/H/I/J
R
460
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 15)
Info
All PROSITE Patterns/Profiles
1: PYRIDINE_REDOX_1 (A:42-52,B:42-52,C:42-52,D:42-52,E:...)
2: PSBD (K:130-167,L:130-167,M:130-167,N:13...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PYRIDINE_REDOX_1
PS00076
Pyridine nucleotide-disulphide oxidoreductases class-I active site.
DLDH_HUMAN
77-87
10
A:42-52
B:42-52
C:42-52
D:42-52
E:42-52
F:42-52
G:42-52
H:42-52
I:42-52
J:42-52
2
PSBD
PS51826
Peripheral subunit-binding (PSBD) domain profile.
ODPX_HUMAN
183-220
5
K:130-167
L:130-167
M:130-167
N:130-167
O:130-167
[
close PROSITE info
]
Exons
(15, 140)
Info
All Exons
Exon 1.3a (A:3-5 | B:4-5 | C:3-5 | D:4-5 | E:...)
Exon 1.4 (A:5-31 | B:5-31 | C:5-31 | D:5-31 ...)
Exon 1.5 (A:32-54 | B:32-54 | C:32-54 | D:32...)
Exon 1.6a (A:55-78 | B:55-78 | C:55-78 | D:55...)
Exon 1.7e (A:78-111 | B:78-111 | C:78-111 | D...)
Exon 1.8b (A:112-159 | B:112-159 | C:112-159 ...)
Exon 1.9a (A:160-193 | B:160-193 | C:160-193 ...)
Exon 1.10b (A:194-257 | B:194-257 | C:194-257 ...)
Exon 1.11 (A:257-314 | B:257-314 | C:257-314 ...)
Exon 1.12 (A:314-377 | B:314-377 | C:314-377 ...)
Exon 1.13 (A:378-423 | B:378-423 | C:378-423 ...)
Exon 1.14 (A:424-453 | B:424-453 | C:424-453 ...)
Exon 1.15e (A:454-474 | B:454-474 | C:454-474 ...)
Exon 2.7c (K:130-161 | L:130-161 | M:130-161 ...)
Exon 2.8 (K:161-172 | L:161-172 | M:161-172 ...)
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All Exon Boundaries
01: Boundary 1.1a/1.3a
02: Boundary 1.3a/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6a
05: Boundary 1.6a/1.7e
06: Boundary 1.7e/1.8b
07: Boundary 1.8b/1.9a
08: Boundary 1.9a/1.10b
09: Boundary 1.10b/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
13: Boundary 1.14/1.15e
14: Boundary 1.15e/-
15: Boundary 2.6/2.7c
16: Boundary 2.7c/2.8
17: Boundary 2.8/2.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000205402
1a
ENSE00001876887
chr7:
107531415-107531734
320
DLDH_HUMAN
1-13
13
0
-
-
1.3a
ENST00000205402
3a
ENSE00000715773
chr7:
107533645-107533723
79
DLDH_HUMAN
14-40
27
10
A:3-5
B:4-5
C:3-5
D:4-5
E:3-5
F:4-5
G:3-5
H:3-5
I:3-5
J:3-5
3
2
3
2
3
2
3
3
3
3
1.4
ENST00000205402
4
ENSE00000715774
chr7:
107542183-107542262
80
DLDH_HUMAN
40-66
27
10
A:5-31
B:5-31
C:5-31
D:5-31
E:5-31
F:5-31
G:5-31
H:5-31
I:5-31
J:5-31
27
27
27
27
27
27
27
27
27
27
1.5
ENST00000205402
5
ENSE00000715776
chr7:
107542770-107542838
69
DLDH_HUMAN
67-89
23
10
A:32-54
B:32-54
C:32-54
D:32-54
E:32-54
F:32-54
G:32-54
H:32-54
I:32-54
J:32-54
23
23
23
23
23
23
23
23
23
23
1.6a
ENST00000205402
6a
ENSE00001665843
chr7:
107543923-107543992
70
DLDH_HUMAN
90-113
24
10
A:55-78
B:55-78
C:55-78
D:55-78
E:55-78
F:55-78
G:55-78
H:55-78
I:55-78
J:55-78
24
24
24
24
24
24
24
24
24
24
1.7e
ENST00000205402
7e
ENSE00001717474
chr7:
107545403-107545503
101
DLDH_HUMAN
113-146
34
10
A:78-111
B:78-111
C:78-111
D:78-111
E:78-111
F:78-111
G:78-111
H:78-111
I:78-111
J:78-111
34
34
34
34
34
34
34
34
34
34
1.8b
ENST00000205402
8b
ENSE00001761545
chr7:
107545806-107545949
144
DLDH_HUMAN
147-194
48
10
A:112-159
B:112-159
C:112-159
D:112-159
E:112-159
F:112-159
G:112-159
H:112-159
I:112-159
J:112-159
48
48
48
48
48
48
48
48
48
48
1.9a
ENST00000205402
9a
ENSE00001638968
chr7:
107546712-107546813
102
DLDH_HUMAN
195-228
34
10
A:160-193
B:160-193
C:160-193
D:160-193
E:160-193
F:160-193
G:160-193
H:160-193
I:160-193
J:160-193
34
34
34
34
34
34
34
34
34
34
1.10b
ENST00000205402
10b
ENSE00001672433
chr7:
107555951-107556141
191
DLDH_HUMAN
229-292
64
10
A:194-257
B:194-257
C:194-257
D:194-257
E:194-257
F:194-257
G:194-257
H:194-257
I:194-257
J:194-257
64
64
64
64
64
64
64
64
64
64
1.11
ENST00000205402
11
ENSE00001609201
chr7:
107557239-107557409
171
DLDH_HUMAN
292-349
58
10
A:257-314
B:257-314
C:257-314
D:257-314
E:257-314
F:257-314
G:257-314
H:257-314
I:257-314 (gaps)
J:257-314
58
58
58
58
58
58
58
58
58
58
1.12
ENST00000205402
12
ENSE00001752704
chr7:
107557718-107557907
190
DLDH_HUMAN
349-412
64
10
A:314-377
B:314-377
C:314-377
D:314-377
E:314-377
F:314-377
G:314-377
H:314-377
I:314-377
J:314-377
64
64
64
64
64
64
64
64
64
64
1.13
ENST00000205402
13
ENSE00001658920
chr7:
107558369-107558506
138
DLDH_HUMAN
413-458
46
10
A:378-423
B:378-423
C:378-423
D:378-423
E:378-423
F:378-423
G:378-423
H:378-423
I:378-423
J:378-423
46
46
46
46
46
46
46
46
46
46
1.14
ENST00000205402
14
ENSE00001606668
chr7:
107559455-107559544
90
DLDH_HUMAN
459-488
30
10
A:424-453
B:424-453
C:424-453
D:424-453
E:424-453
F:424-453
G:424-453
H:424-453
I:424-453
J:424-453
30
30
30
30
30
30
30
30
30
30
1.15e
ENST00000205402
15e
ENSE00000881778
chr7:
107559639-107560360
722
DLDH_HUMAN
489-509
21
10
A:454-474
B:454-474
C:454-474
D:454-474
E:454-474
F:454-474
G:454-474
H:454-474
I:454-474
J:454-474
21
21
21
21
21
21
21
21
21
21
2.3a
ENST00000227868
3a
ENSE00000824440
chr11:
34938119-34938362
244
ODPX_HUMAN
1-54
54
0
-
-
2.4
ENST00000227868
4
ENSE00000710349
chr11:
34952951-34953031
81
ODPX_HUMAN
54-81
28
0
-
-
2.5
ENST00000227868
5
ENSE00001150239
chr11:
34969053-34969153
101
ODPX_HUMAN
81-114
34
0
-
-
2.6
ENST00000227868
6
ENSE00001150231
chr11:
34978931-34979130
200
ODPX_HUMAN
115-181
67
0
-
-
2.7c
ENST00000227868
7c
ENSE00001150226
chr11:
34981967-34982065
99
ODPX_HUMAN
181-214
34
5
K:130-161
L:130-161
M:130-161
N:130-161
O:130-161
32
32
32
32
32
2.8
ENST00000227868
8
ENSE00001150220
chr11:
34988187-34988361
175
ODPX_HUMAN
214-272
59
5
K:161-172
L:161-172
M:161-172
N:161-172
O:161-172
12
12
12
12
12
2.9
ENST00000227868
9
ENSE00001330369
chr11:
34991686-34991833
148
ODPX_HUMAN
273-322
50
0
-
-
2.11b
ENST00000227868
11b
ENSE00000710371
chr11:
34999671-34999729
59
ODPX_HUMAN
322-341
20
0
-
-
2.12a
ENST00000227868
12a
ENSE00000710373
chr11:
35006117-35006275
159
ODPX_HUMAN
342-394
53
0
-
-
2.13
ENST00000227868
13
ENSE00000710375
chr11:
35013862-35013926
65
ODPX_HUMAN
395-416
22
0
-
-
2.14c
ENST00000227868
14c
ENSE00002154149
chr11:
35016461-35017518
1058
ODPX_HUMAN
416-501
86
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
(2, 30)
Info
all CATH domains
1a: CATH_2f5zA03 (A:351-474)
1b: CATH_2f5zB03 (B:351-474)
1c: CATH_2f5zC03 (C:351-474)
1d: CATH_2f5zD03 (D:351-474)
1e: CATH_2f5zE03 (E:351-474)
1f: CATH_2f5zF03 (F:351-474)
1g: CATH_2f5zG03 (G:351-474)
1h: CATH_2f5zH03 (H:351-474)
1i: CATH_2f5zI03 (I:351-474)
1j: CATH_2f5zJ03 (J:351-474)
2a: CATH_2f5zB01 (B:4-152,B:279-350)
2b: CATH_2f5zA02 (A:153-278)
2c: CATH_2f5zB02 (B:153-278)
2d: CATH_2f5zC02 (C:153-278)
2e: CATH_2f5zD02 (D:153-278)
2f: CATH_2f5zE02 (E:153-278)
2g: CATH_2f5zF02 (F:153-278)
2h: CATH_2f5zG02 (G:153-278)
2i: CATH_2f5zH02 (H:153-278)
2j: CATH_2f5zJ02 (J:153-278)
2k: CATH_2f5zI02 (I:153-278)
2l: CATH_2f5zD01 (D:4-152,D:279-350)
2m: CATH_2f5zF01 (F:4-152,F:279-350)
2n: CATH_2f5zA01 (A:3-152,A:279-350)
2o: CATH_2f5zC01 (C:3-152,C:279-350)
2p: CATH_2f5zE01 (E:3-152,E:279-350)
2q: CATH_2f5zG01 (G:3-152,G:279-350)
2r: CATH_2f5zH01 (H:3-152,H:279-350)
2s: CATH_2f5zI01 (I:3-152,I:279-350)
2t: CATH_2f5zJ01 (J:3-152,J:279-350)
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)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
[code=3.30.390.30, no name defined]
(99)
Human (Homo sapiens)
(26)
1a
2f5zA03
A:351-474
1b
2f5zB03
B:351-474
1c
2f5zC03
C:351-474
1d
2f5zD03
D:351-474
1e
2f5zE03
E:351-474
1f
2f5zF03
F:351-474
1g
2f5zG03
G:351-474
1h
2f5zH03
H:351-474
1i
2f5zI03
I:351-474
1j
2f5zJ03
J:351-474
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Human (Homo sapiens)
(57)
2a
2f5zB01
B:4-152,B:279-350
2b
2f5zA02
A:153-278
2c
2f5zB02
B:153-278
2d
2f5zC02
C:153-278
2e
2f5zD02
D:153-278
2f
2f5zE02
E:153-278
2g
2f5zF02
F:153-278
2h
2f5zG02
G:153-278
2i
2f5zH02
H:153-278
2j
2f5zJ02
J:153-278
2k
2f5zI02
I:153-278
2l
2f5zD01
D:4-152,D:279-350
2m
2f5zF01
F:4-152,F:279-350
2n
2f5zA01
A:3-152,A:279-350
2o
2f5zC01
C:3-152,C:279-350
2p
2f5zE01
E:3-152,E:279-350
2q
2f5zG01
G:3-152,G:279-350
2r
2f5zH01
H:3-152,H:279-350
2s
2f5zI01
I:3-152,I:279-350
2t
2f5zJ01
J:3-152,J:279-350
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Pfam Domains
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