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Asym. Unit
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Asym.Unit (458 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE ERYTHROID P55 PDZ DOMAIN
Authors
:
H. Kusunoki, T. Kohno
Date
:
31 Oct 05 (Deposition) - 10 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Maguk, P55, Pdz, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Kusunoki, T. Kohno
Solution Structure Of Human Erythroid P55 Pdz Domain
Proteins V. 64 804 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: PDZ (A:71-152)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
EM55_HUMAN
71-152
1
A:71-152
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Exons
(4, 4)
Info
All Exons
Exon 1.5c (A:69-82)
Exon 1.6a (A:83-109)
Exon 1.7b (A:109-137)
Exon 1.8b (A:138-153)
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All Exon Boundaries
1: Boundary 1.2b/1.5c
2: Boundary 1.5c/1.6a
3: Boundary 1.6a/1.7b
4: Boundary 1.7b/1.8b
5: Boundary 1.8b/1.9c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000369534
2b
ENSE00001842847
X:154033796-154033547
250
EM55_HUMAN
1-34
34
0
-
-
1.5c
ENST00000369534
5c
ENSE00001622979
X:154020560-154020417
144
EM55_HUMAN
35-82
48
1
A:69-82
14
1.6a
ENST00000369534
6a
ENSE00001697405
X:154020122-154020044
79
EM55_HUMAN
83-109
27
1
A:83-109
27
1.7b
ENST00000369534
7b
ENSE00001607029
X:154019343-154019258
86
EM55_HUMAN
109-137
29
1
A:109-137
29
1.8b
ENST00000369534
8b
ENSE00002179637
X:154018297-154018229
69
EM55_HUMAN
138-160
23
1
A:138-153
16
1.9c
ENST00000369534
9c
ENSE00001675460
X:154014675-154014479
197
EM55_HUMAN
161-226
66
0
-
-
1.10d
ENST00000369534
10d
ENSE00001691038
X:154013432-154013326
107
EM55_HUMAN
226-262
37
0
-
-
1.11b
ENST00000369534
11b
ENSE00001641741
X:154012383-154012303
81
EM55_HUMAN
262-289
28
0
-
-
1.12a
ENST00000369534
12a
ENSE00001684797
X:154011782-154011702
81
EM55_HUMAN
289-316
28
0
-
-
1.12g
ENST00000369534
12g
ENSE00001658958
X:154010077-154009875
203
EM55_HUMAN
316-383
68
0
-
-
1.13b
ENST00000369534
13b
ENSE00001612210
X:154009588-154009514
75
EM55_HUMAN
384-408
25
0
-
-
1.14e
ENST00000369534
14e
ENSE00001863406
X:154007628-154006959
670
EM55_HUMAN
409-466
58
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ev8a_ (A:)
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Protein Domains
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
PDZ domain
(180)
Protein domain
:
automated matches
(53)
Human (Homo sapiens) [TaxId: 9606]
(34)
1a
d2ev8a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2ev8A00 (A:69-153)
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
2ev8A00
A:69-153
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Pfam Domains
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Chain A
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