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2EQS
Asym. Unit
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Asym.Unit (539 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE S1 RNA BINDING DOMAIN OF HUMAN ATP-DEPENDENT RNA HELICASE DHX8
Authors
:
S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Mar 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
S1 Domain, Ob-Fold, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of The S1 Rna Binding Domain Of Human Atp-Dependent Rna Helicase Dhx8
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: S1 (A:265-336)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
S1
PS50126
S1 domain profile.
DHX8_HUMAN
265-336
1
A:265-336
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Exons
(3, 3)
Info
All Exons
Exon 1.6 (A:253-288 (gaps))
Exon 1.7 (A:288-336)
Exon 1.8 (A:337-355)
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000262415
1
ENSE00001280005
chr17:
41561334-41561553
220
DHX8_HUMAN
1-50
50
0
-
-
1.2
ENST00000262415
2
ENSE00000897775
chr17:
41566817-41566902
86
DHX8_HUMAN
50-78
29
0
-
-
1.3
ENST00000262415
3
ENSE00000897782
chr17:
41567759-41567831
73
DHX8_HUMAN
79-103
25
0
-
-
1.4
ENST00000262415
4
ENSE00000897789
chr17:
41568533-41568618
86
DHX8_HUMAN
103-131
29
0
-
-
1.5
ENST00000262415
5
ENSE00000897797
chr17:
41569551-41569660
110
DHX8_HUMAN
132-168
37
0
-
-
1.6
ENST00000262415
6
ENSE00001133080
chr17:
41570049-41570408
360
DHX8_HUMAN
168-288
121
1
A:253-288 (gaps)
63
1.7
ENST00000262415
7
ENSE00001133071
chr17:
41570813-41570957
145
DHX8_HUMAN
288-336
49
1
A:288-336
49
1.8
ENST00000262415
8
ENSE00001133060
chr17:
41571051-41571254
204
DHX8_HUMAN
337-404
68
1
A:337-355
19
1.9
ENST00000262415
9
ENSE00001118560
chr17:
41573549-41573636
88
DHX8_HUMAN
405-434
30
0
-
-
1.10
ENST00000262415
10
ENSE00001118561
chr17:
41576230-41576327
98
DHX8_HUMAN
434-466
33
0
-
-
1.11
ENST00000262415
11
ENSE00000731685
chr17:
41577324-41577471
148
DHX8_HUMAN
467-516
50
0
-
-
1.12
ENST00000262415
12
ENSE00000731684
chr17:
41582012-41582193
182
DHX8_HUMAN
516-576
61
0
-
-
1.13
ENST00000262415
13
ENSE00000731682
chr17:
41584371-41584565
195
DHX8_HUMAN
577-641
65
0
-
-
1.14
ENST00000262415
14
ENSE00000731681
chr17:
41584871-41585056
186
DHX8_HUMAN
642-703
62
0
-
-
1.15
ENST00000262415
15
ENSE00000731679
chr17:
41585177-41585387
211
DHX8_HUMAN
704-774
71
0
-
-
1.16
ENST00000262415
16
ENSE00001279910
chr17:
41585707-41585888
182
DHX8_HUMAN
774-834
61
0
-
-
1.17
ENST00000262415
17
ENSE00001279902
chr17:
41590730-41590870
141
DHX8_HUMAN
835-881
47
0
-
-
1.18
ENST00000262415
18
ENSE00001279895
chr17:
41594535-41594690
156
DHX8_HUMAN
882-933
52
0
-
-
1.19
ENST00000262415
19
ENSE00001279890
chr17:
41597498-41597635
138
DHX8_HUMAN
934-979
46
0
-
-
1.20
ENST00000262415
20
ENSE00001279884
chr17:
41598119-41598247
129
DHX8_HUMAN
980-1022
43
0
-
-
1.21
ENST00000262415
21
ENSE00001279875
chr17:
41598737-41598933
197
DHX8_HUMAN
1023-1088
66
0
-
-
1.22
ENST00000262415
22
ENSE00001279867
chr17:
41599415-41599594
180
DHX8_HUMAN
1088-1148
61
0
-
-
1.23
ENST00000262415
23
ENSE00001311829
chr17:
41600996-41601680
685
DHX8_HUMAN
1148-1220
73
0
-
-
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Asymmetric Unit 1
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