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Asym. Unit
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Asym.Unit (458 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF TUDOR DOMAIN-CONTAINING PROTEIN 4
Authors
:
W. Dang, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Mar 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nmr, Tudor Domain, Tudor Domain-Containing Protein 4, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transcription
(Keyword Search:
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]
)
Reference
:
W. Dang, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama
Solution Structure Of The Tudor Domain Of Tudor Domain-Containing Protein 4
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TUDOR (-|A:21-80|-|-)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TUDOR
PS50304
Tudor domain profile.
RNF17_HUMAN
726-784
962-1021
1228-1285
1479-1539
1
-
A:21-80
-
-
[
close PROSITE info
]
Exons
(3, 3)
Info
All Exons
Exon 1.25a (A:1-3)
Exon 1.26 (A:3-53)
Exon 1.27 (A:54-85)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.24/1.25a
2: Boundary 1.25a/1.26
3: Boundary 1.26/1.27
4: Boundary 1.27/1.28
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000255324
1a
ENSE00001843925
chr13:
25338290-25338471
182
RNF17_HUMAN
1-44
44
0
-
-
1.2
ENST00000255324
2
ENSE00001696954
chr13:
25341410-25341504
95
RNF17_HUMAN
44-75
32
0
-
-
1.3
ENST00000255324
3
ENSE00001619772
chr13:
25348951-25349042
92
RNF17_HUMAN
76-106
31
0
-
-
1.4
ENST00000255324
4
ENSE00001782677
chr13:
25352433-25352544
112
RNF17_HUMAN
106-143
38
0
-
-
1.5
ENST00000255324
5
ENSE00001798456
chr13:
25353805-25353885
81
RNF17_HUMAN
144-170
27
0
-
-
1.6
ENST00000255324
6
ENSE00001630455
chr13:
25355982-25356082
101
RNF17_HUMAN
171-204
34
0
-
-
1.7b
ENST00000255324
7b
ENSE00001794042
chr13:
25362126-25362297
172
RNF17_HUMAN
204-261
58
0
-
-
1.8
ENST00000255324
8
ENSE00001758443
chr13:
25363486-25363562
77
RNF17_HUMAN
262-287
26
0
-
-
1.9
ENST00000255324
9
ENSE00001800443
chr13:
25363836-25363910
75
RNF17_HUMAN
287-312
26
0
-
-
1.10
ENST00000255324
10
ENSE00001723012
chr13:
25367180-25367484
305
RNF17_HUMAN
312-414
103
0
-
-
1.12b
ENST00000255324
12b
ENSE00001687093
chr13:
25370275-25370433
159
RNF17_HUMAN
414-467
54
0
-
-
1.13
ENST00000255324
13
ENSE00001646722
chr13:
25373533-25373722
190
RNF17_HUMAN
467-530
64
0
-
-
1.14
ENST00000255324
14
ENSE00001767298
chr13:
25374504-25374672
169
RNF17_HUMAN
530-586
57
0
-
-
1.15
ENST00000255324
15
ENSE00001695592
chr13:
25376519-25376709
191
RNF17_HUMAN
587-650
64
0
-
-
1.17
ENST00000255324
17
ENSE00001684621
chr13:
25378426-25378567
142
RNF17_HUMAN
650-697
48
0
-
-
1.20
ENST00000255324
20
ENSE00001706074
chr13:
25399757-25399910
154
RNF17_HUMAN
698-749
52
0
-
-
1.22
ENST00000255324
22
ENSE00001671772
chr13:
25404622-25404737
116
RNF17_HUMAN
749-787
39
0
-
-
1.23
ENST00000255324
23
ENSE00001786297
chr13:
25405996-25406116
121
RNF17_HUMAN
788-828
41
0
-
-
1.24
ENST00000255324
24
ENSE00001729598
chr13:
25416179-25416299
121
RNF17_HUMAN
828-868
41
0
-
-
1.25a
ENST00000255324
25a
ENSE00001731008
chr13:
25417882-25418109
228
RNF17_HUMAN
868-944
77
1
A:1-3
3
1.26
ENST00000255324
26
ENSE00001621489
chr13:
25418790-25418940
151
RNF17_HUMAN
944-994
51
1
A:3-53
51
1.27
ENST00000255324
27
ENSE00001144924
chr13:
25419099-25419217
119
RNF17_HUMAN
995-1034
40
1
A:54-85
32
1.28
ENST00000255324
28
ENSE00001144918
chr13:
25424479-25424581
103
RNF17_HUMAN
1034-1068
35
0
-
-
1.29
ENST00000255324
29
ENSE00001144911
chr13:
25425594-25425709
116
RNF17_HUMAN
1069-1107
39
0
-
-
1.30
ENST00000255324
30
ENSE00001144905
chr13:
25427993-25428282
290
RNF17_HUMAN
1107-1204
98
0
-
-
1.31
ENST00000255324
31
ENSE00001144899
chr13:
25433139-25433302
164
RNF17_HUMAN
1204-1258
55
0
-
-
1.32
ENST00000255324
32
ENSE00001144895
chr13:
25435406-25435525
120
RNF17_HUMAN
1259-1298
40
0
-
-
1.33b
ENST00000255324
33b
ENSE00001391074
chr13:
25436851-25436931
81
RNF17_HUMAN
1299-1325
27
0
-
-
1.34
ENST00000255324
34
ENSE00001375546
chr13:
25439011-25439136
126
RNF17_HUMAN
1326-1367
42
0
-
-
1.35
ENST00000255324
35
ENSE00001144882
chr13:
25440282-25440341
60
RNF17_HUMAN
1368-1387
20
0
-
-
1.36
ENST00000255324
36
ENSE00001144876
chr13:
25442738-25442854
117
RNF17_HUMAN
1388-1426
39
0
-
-
1.37
ENST00000255324
37
ENSE00001144871
chr13:
25444709-25444877
169
RNF17_HUMAN
1427-1483
57
0
-
-
1.38a
ENST00000255324
38a
ENSE00001144865
chr13:
25448252-25448387
136
RNF17_HUMAN
1483-1528
46
0
-
-
1.39
ENST00000255324
39
ENSE00000906526
chr13:
25451135-25451324
190
RNF17_HUMAN
1528-1591
64
0
-
-
1.40
ENST00000255324
40
ENSE00000906525
chr13:
25453325-25453433
109
RNF17_HUMAN
1592-1623
32
0
-
-
1.41b
ENST00000255324
41b
ENSE00001490241
chr13:
25453875-25454059
185
RNF17_HUMAN
-
0
0
-
-
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