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Asym. Unit
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Asym.Unit (214 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE 4TH C2H2 TYPE ZINC FINGER DOMAIN OF ZINC FINGER PROTEIN 28 HOMOLOG
Authors
:
K. Futami, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Mar 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
C2H2, Zinc Finger Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
K. Futami, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of The 4Th C2H2 Type Zinc Finger Domain Of Zinc Finger Protein 28 Homolog
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
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1: ZINC_FINGER_C2H2_1 (-|A:494-498|-|A:507-527|-|-|-|-|-|...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
ZFP28_HUMAN
422-442
450-470
478-499
507-527
535-555
563-583
591-611
619-639
647-667
675-695
703-723
731-751
759-779
787-807
2
-
A:494-498
-
A:507-527
-
-
-
-
-
-
-
-
-
-
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Exons
(1, 1)
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Exon 1.8 (A:493-538 (gaps))
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1: Boundary 1.7/1.8
2: Boundary 1.8/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000301318
1
ENSE00000728674
chr19:
57050317-57050595
279
ZFP28_HUMAN
1-70
70
0
-
-
1.2
ENST00000301318
2
ENSE00001319353
chr19:
57050994-57051085
92
ZFP28_HUMAN
70-100
31
0
-
-
1.3
ENST00000301318
3
ENSE00001638838
chr19:
57058877-57059003
127
ZFP28_HUMAN
101-143
43
0
-
-
1.4
ENST00000301318
4
ENSE00000728686
chr19:
57059176-57059271
96
ZFP28_HUMAN
143-175
33
0
-
-
1.5
ENST00000301318
5
ENSE00000728690
chr19:
57060327-57060490
164
ZFP28_HUMAN
175-229
55
0
-
-
1.6
ENST00000301318
6
ENSE00000728695
chr19:
57061436-57061550
115
ZFP28_HUMAN
230-268
39
0
-
-
1.7
ENST00000301318
7
ENSE00000728701
chr19:
57061879-57061974
96
ZFP28_HUMAN
268-300
33
0
-
-
1.8
ENST00000301318
8
ENSE00001290596
chr19:
57065053-57068169
3117
ZFP28_HUMAN
300-868
569
1
A:493-538 (gaps)
142
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2epza1 (A:500-527)
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(
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Organisms
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(
)
Class
:
Small proteins
(3458)
Fold
:
beta-beta-alpha zinc fingers
(183)
Superfamily
:
beta-beta-alpha zinc fingers
(183)
Family
:
Classic zinc finger, C2H2
(162)
Protein domain
:
automated matches
(93)
Human (Homo sapiens) [TaxId: 9606]
(92)
1a
d2epza1
A:500-527
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CATH Domains
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Pfam Domains
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Chain A
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