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Asym. Unit
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Asym.Unit (218 KB)
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Models
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Title
:
SOLUTION STRUCTURE OF THE C2H2 TYPE ZINC FINGER (REGION 628-660) OF HUMAN ZINC FINGER PROTEIN 95 HOMOLOG
Authors
:
N. Tochio, T. Tomizawa, H. Abe, K. Saito, H. Li, M. Sato, S. Koshiba, N. Kobayashi, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 Mar 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Zf-C2H2, Nmr, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Tochio, T. Tomizawa, H. Abe, K. Saito, H. Li, M. Sato, S. Koshiba, N. Kobayashi, T. Kigawa, S. Yokoyama
Solution Structure Of The C2H2 Type Zinc Finger (Region 628-660) Of Human Zinc Finger Protein 95 Homolog
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
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1: ZINC_FINGER_C2H2_1 (-|-|-|-|-|-|-|A:15-35|-|A:42-45|-|...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
ZKSC5_HUMAN
348-368
376-396
404-424
432-452
551-571
579-599
607-627
635-655
663-683
719-739
775-795
803-823
2
-
-
-
-
-
-
-
A:15-35
-
A:42-45
-
-
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Exons
(1, 1)
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Exon 1.9c (A:1-46 (gaps))
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1: Boundary 1.8/1.9c
2: Boundary 1.9c/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000394170
2
ENSE00001517668
chr7:
99102573-99102783
211
ZKSC5_HUMAN
-
0
0
-
-
1.3c
ENST00000394170
3c
ENSE00001375021
chr7:
99103628-99104081
454
ZKSC5_HUMAN
1-138
138
0
-
-
1.4
ENST00000394170
4
ENSE00001385326
chr7:
99110076-99110214
139
ZKSC5_HUMAN
139-185
47
0
-
-
1.6
ENST00000394170
6
ENSE00000708266
chr7:
99117450-99117532
83
ZKSC5_HUMAN
185-212
28
0
-
-
1.7
ENST00000394170
7
ENSE00001102972
chr7:
99117792-99117927
136
ZKSC5_HUMAN
213-258
46
0
-
-
1.8
ENST00000394170
8
ENSE00001734863
chr7:
99123436-99124041
606
ZKSC5_HUMAN
258-460
203
0
-
-
1.9c
ENST00000394170
9c
ENSE00001828654
chr7:
99128731-99131445
2715
ZKSC5_HUMAN
460-839
380
1
A:1-46 (gaps)
209
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d2emza1 (A:8-35)
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Organisms
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(
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Class
:
Small proteins
(3458)
Fold
:
beta-beta-alpha zinc fingers
(183)
Superfamily
:
beta-beta-alpha zinc fingers
(183)
Family
:
Classic zinc finger, C2H2
(162)
Protein domain
:
automated matches
(93)
Human (Homo sapiens) [TaxId: 9606]
(92)
1a
d2emza1
A:8-35
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CATH Domains
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Pfam Domains
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