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2EGA
Asym. Unit
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Asym.Unit (341 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIRST SH3 DOMAIN FROM HUMAN KIAA0418 PROTEIN
Authors
:
K. Inoue, C. Kurosaki, M. Yoshida, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 Feb 07 (Deposition) - 28 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Sh3 Domain, Kiaa0418 Protein, Sh3Md1, Sh3 Multiple Domains 1, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Inoue, C. Kurosaki, M. Yoshida, F. Hayashi, S. Yokoyama
Solution Structure Of The First Sh3 Domain From Human Kiaa0418 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SH3 (A:8-64|-|-|-|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH3
PS50002
Src homology 3 (SH3) domain profile.
SPD2A_HUMAN
166-225
266-325
448-507
851-899
1086-1133
1
A:8-64
-
-
-
-
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Exons
(5, 5)
Info
All Exons
Exon 1.8 (A:1-3)
Exon 1.9 (A:4-4)
Exon 1.10 (A:4-42 (gaps))
Exon 1.11 (A:42-68 (gaps))
Exon 1.12 (A:68-70 (gaps))
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1: Boundary 1.5/1.8
2: Boundary 1.8/1.9
3: Boundary 1.9/1.10
4: Boundary 1.10/1.11
5: Boundary 1.11/1.12
6: Boundary 1.12/1.13
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000369774
1a
ENSE00001611723
chr10:
105615301-105614953
349
SPD2A_HUMAN
1-24
24
0
-
-
1.2a
ENST00000369774
2a
ENSE00001385766
chr10:
105561120-105561040
81
SPD2A_HUMAN
25-51
27
0
-
-
1.3
ENST00000369774
3
ENSE00001627592
chr10:
105526927-105526852
76
SPD2A_HUMAN
52-77
26
0
-
-
1.4
ENST00000369774
4
ENSE00001274601
chr10:
105495566-105495490
77
SPD2A_HUMAN
77-102
26
0
-
-
1.5
ENST00000369774
5
ENSE00000811670
chr10:
105484119-105484028
92
SPD2A_HUMAN
103-133
31
0
-
-
1.8
ENST00000369774
8
ENSE00001274660
chr10:
105452814-105452786
29
SPD2A_HUMAN
133-143
11
1
A:1-3
3
1.9
ENST00000369774
9
ENSE00001720125
chr10:
105428410-105428366
45
SPD2A_HUMAN
143-158
16
1
A:4-4
1
1.10
ENST00000369774
10
ENSE00001785452
chr10:
105420872-105420741
132
SPD2A_HUMAN
158-202
45
1
A:4-42 (gaps)
45
1.11
ENST00000369774
11
ENSE00001177607
chr10:
105386959-105386846
114
SPD2A_HUMAN
202-240
39
1
A:42-68 (gaps)
39
1.12
ENST00000369774
12
ENSE00000987725
chr10:
105382310-105382227
84
SPD2A_HUMAN
240-268
29
1
A:68-70 (gaps)
19
1.13
ENST00000369774
13
ENSE00001177600
chr10:
105377071-105376954
118
SPD2A_HUMAN
268-307
40
0
-
-
1.14
ENST00000369774
14
ENSE00001177595
chr10:
105372947-105372610
338
SPD2A_HUMAN
307-420
114
0
-
-
1.15
ENST00000369774
15
ENSE00001177588
chr10:
105371387-105371338
50
SPD2A_HUMAN
420-436
17
0
-
-
1.16
ENST00000369774
16
ENSE00000723396
chr10:
105365674-105365555
120
SPD2A_HUMAN
437-476
40
0
-
-
1.17d
ENST00000369774
17d
ENSE00001939716
chr10:
105363546-105353784
9763
SPD2A_HUMAN
477-1133
657
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2egaa_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
SH3-domain
(369)
Family
:
automated matches
(114)
Protein domain
:
automated matches
(114)
Human (Homo sapiens) [TaxId: 9606]
(74)
1a
d2egaa_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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