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Asym. Unit
Info
Asym.Unit (215 KB)
Biol.Unit 1 (106 KB)
Biol.Unit 2 (105 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE COMPLEX OF GOAT LACTOPEROXIDASE WITH PHOSPHATE AT 2.94 A RESOLUTION
Authors
:
A. K. Singh, G. Hariprasad, R. Prem Kumar, N. Singh, A. Bhushan, S. Shar P. Kaur, T. P. Singh
Date
:
22 Feb 07 (Deposition) - 06 Mar 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.94
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Lactoperoxidase, Complex, Phosphate, Milk Protein, Oxidoreductase, Peroxidase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Singh, G. Hariprasad, R. Prem Kumar, N. Singh, A. Bhushan, S. Sharma, P. Kaur, T. P. Singh
Crystal Structure Of The Complex Of Goat Lactoperoxidase With Phosphate At 2. 94 A Resolution
To Be Published
[
close entry info
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Hetero Components
(10, 36)
Info
All Hetero Components
01a: BETA-D-MANNOSE (BMAa)
01b: BETA-D-MANNOSE (BMAb)
01c: BETA-D-MANNOSE (BMAc)
02a: CALCIUM ION (CAa)
02b: CALCIUM ION (CAb)
03a: CARBONATE ION (CO3a)
03b: CARBONATE ION (CO3b)
04a: CYANIDE ION (CYNa)
05a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
05b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
06a: ALPHA-D-MANNOSE (MANa)
06b: ALPHA-D-MANNOSE (MANb)
06c: ALPHA-D-MANNOSE (MANc)
07a: N-ACETYL-D-GLUCOSAMINE (NAGa)
07b: N-ACETYL-D-GLUCOSAMINE (NAGb)
07c: N-ACETYL-D-GLUCOSAMINE (NAGc)
07d: N-ACETYL-D-GLUCOSAMINE (NAGd)
07e: N-ACETYL-D-GLUCOSAMINE (NAGe)
07f: N-ACETYL-D-GLUCOSAMINE (NAGf)
07g: N-ACETYL-D-GLUCOSAMINE (NAGg)
07h: N-ACETYL-D-GLUCOSAMINE (NAGh)
07i: N-ACETYL-D-GLUCOSAMINE (NAGi)
07j: N-ACETYL-D-GLUCOSAMINE (NAGj)
07k: N-ACETYL-D-GLUCOSAMINE (NAGk)
07l: N-ACETYL-D-GLUCOSAMINE (NAGl)
07m: N-ACETYL-D-GLUCOSAMINE (NAGm)
07n: N-ACETYL-D-GLUCOSAMINE (NAGn)
07o: N-ACETYL-D-GLUCOSAMINE (NAGo)
07p: N-ACETYL-D-GLUCOSAMINE (NAGp)
08a: 1-(OXIDOSULFANYL)METHANAMINE (OSMa)
09a: PHOSPHATE ION (PO4a)
09b: PHOSPHATE ION (PO4b)
09c: PHOSPHATE ION (PO4c)
09d: PHOSPHATE ION (PO4d)
09e: PHOSPHATE ION (PO4e)
10a: THIOCYANATE ION (SCNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
CA
2
Ligand/Ion
CALCIUM ION
3
CO3
2
Ligand/Ion
CARBONATE ION
4
CYN
1
Ligand/Ion
CYANIDE ION
5
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
6
MAN
3
Ligand/Ion
ALPHA-D-MANNOSE
7
NAG
16
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
8
OSM
1
Ligand/Ion
1-(OXIDOSULFANYL)METHANAMINE
9
PO4
5
Ligand/Ion
PHOSPHATE ION
10
SCN
1
Ligand/Ion
THIOCYANATE ION
[
close Hetero Component info
]
Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:95 , GLN A:568 , NAG A:597 , CO3 A:2006
BINDING SITE FOR RESIDUE NAG A 596
02
AC2
SOFTWARE
NAG A:596 , MAN A:598 , HOH A:2135 , HOH A:2148
BINDING SITE FOR RESIDUE NAG A 597
03
AC3
SOFTWARE
NAG A:597 , HOH A:2135
BINDING SITE FOR RESIDUE MAN A 598
04
AC4
SOFTWARE
ASN A:205 , SER A:208 , ALA A:214 , VAL A:215 , GLN A:217 , NAG A:600 , HOH A:2043
BINDING SITE FOR RESIDUE NAG A 599
05
AC5
SOFTWARE
GLN A:217 , NAG A:599 , MAN A:601
BINDING SITE FOR RESIDUE NAG A 600
06
AC6
SOFTWARE
NAG A:600
BINDING SITE FOR RESIDUE MAN A 601
07
AC7
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384 , NAG A:603 , HOH A:2171 , PHE B:70
BINDING SITE FOR RESIDUE NAG A 602
08
AC8
SOFTWARE
NAG A:602 , BMA A:604 , HOH A:2097 , HOH A:2171 , HOH A:2187
BINDING SITE FOR RESIDUE NAG A 603
09
AC9
SOFTWARE
NAG A:603 , HOH A:2187 , HOH A:2193
BINDING SITE FOR RESIDUE BMA A 604
10
BC1
SOFTWARE
ASN A:332 , NAG A:606
BINDING SITE FOR RESIDUE NAG A 605
11
BC2
SOFTWARE
NAG A:605 , HOH A:2151 , HOH A:2166 , HOH A:2177
BINDING SITE FOR RESIDUE NAG A 606
12
BC3
SOFTWARE
ALA A:44 , ARG A:45 , TRP A:46 , LEU A:47 , ASN A:341 , VAL A:342 , MET A:446 , TRP A:452
BINDING SITE FOR RESIDUE PO4 A 2001
13
BC4
SOFTWARE
GLU A:363 , TYR A:365 , ARG A:397 , HIS A:558 , ILE A:559 , THR A:560 , LYS A:561
BINDING SITE FOR RESIDUE PO4 A 2002
14
BC5
SOFTWARE
PRO A:461 , LYS A:462 , THR A:463 , GLY A:466
BINDING SITE FOR RESIDUE PO4 A 2005
15
BC6
SOFTWARE
ASN A:95 , ARG A:96 , NAG A:596
BINDING SITE FOR RESIDUE CO3 A 2006
16
BC7
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
BINDING SITE FOR RESIDUE CA A 1000
17
BC8
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , GLU A:258 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , VAL A:354 , PHE A:380 , LEU A:417 , GLN A:423 , LEU A:433 , ILE A:436 , ARG A:440 , CYN A:2011 , SCN A:2012
BINDING SITE FOR RESIDUE HEM A 1001
18
BC9
SOFTWARE
GLN A:105 , HIS A:109 , HEM A:1001 , SCN A:2012
BINDING SITE FOR RESIDUE CYN A 2011
19
CC1
SOFTWARE
ARG A:255 , HEM A:1001 , CYN A:2011 , HOH A:2155
BINDING SITE FOR RESIDUE SCN A 2012
20
CC2
SOFTWARE
ASN B:95 , NAG B:597 , CO3 B:2007
BINDING SITE FOR RESIDUE NAG B 596
21
CC3
SOFTWARE
NAG B:596 , MAN B:598
BINDING SITE FOR RESIDUE NAG B 597
22
CC4
SOFTWARE
NAG B:597
BINDING SITE FOR RESIDUE MAN B 598
23
CC5
SOFTWARE
ASN B:205 , SER B:208 , ALA B:214 , VAL B:215 , GLN B:217 , NAG B:600
BINDING SITE FOR RESIDUE NAG B 599
24
CC6
SOFTWARE
GLN B:217 , TRP B:220 , NAG B:599 , BMA B:601 , HOH B:2170
BINDING SITE FOR RESIDUE NAG B 600
25
CC7
SOFTWARE
NAG B:600
BINDING SITE FOR RESIDUE BMA B 601
26
CC8
SOFTWARE
PHE A:70 , LYS A:485 , ASN B:241 , ALA B:244 , NAG B:603
BINDING SITE FOR RESIDUE NAG B 602
27
CC9
SOFTWARE
LYS A:485 , NAG B:602 , BMA B:604 , HOH B:2094 , HOH B:2177
BINDING SITE FOR RESIDUE NAG B 603
28
DC1
SOFTWARE
NAG B:603 , HOH B:2148
BINDING SITE FOR RESIDUE BMA B 604
29
DC2
SOFTWARE
ASN B:332 , NAG B:606
BINDING SITE FOR RESIDUE NAG B 605
30
DC3
SOFTWARE
NAG B:605 , HOH B:2074
BINDING SITE FOR RESIDUE NAG B 606
31
DC4
SOFTWARE
GLU B:363 , TYR B:365 , ARG B:397 , HIS B:558 , ILE B:559 , THR B:560 , LYS B:561
BINDING SITE FOR RESIDUE PO4 B 2003
32
DC5
SOFTWARE
ALA B:44 , ARG B:45 , TRP B:46 , LEU B:47 , SER B:340 , ASN B:341 , VAL B:342 , MET B:446 , TRP B:452 , HOH B:2118
BINDING SITE FOR RESIDUE PO4 B 2004
33
DC6
SOFTWARE
ASN B:95 , ARG B:96 , ARG B:504 , ARG B:506 , NAG B:596
BINDING SITE FOR RESIDUE CO3 B 2007
34
DC7
SOFTWARE
ASP B:110 , THR B:184 , PHE B:186 , ASP B:188 , SER B:190
BINDING SITE FOR RESIDUE CA B 1000
35
DC8
SOFTWARE
MET B:101 , GLY B:104 , GLN B:105 , ASP B:108 , ASP B:112 , PHE B:113 , ALA B:114 , ARG B:255 , GLU B:258 , THR B:344 , PHE B:347 , ARG B:348 , GLY B:350 , HIS B:351 , VAL B:354 , PHE B:380 , LEU B:417 , ARG B:440 , OSM B:2021 , HOH B:2126 , HOH B:2155
BINDING SITE FOR RESIDUE HEM B 1021
36
DC9
SOFTWARE
GLN B:105 , HIS B:109 , ARG B:255 , GLU B:258 , HEM B:1021
BINDING SITE FOR RESIDUE OSM B 2021
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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View:
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
[
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