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2E7G
Asym. Unit
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Asym.Unit (657 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF PUTATIVE RIBOSOME-BINDING FACTOR A (RBFA) FROM HUMAN MUTOCHONDRIAL PRECURSOR
Authors
:
M. Furue, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
09 Jan 07 (Deposition) - 10 Jul 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Rbfa, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Furue, S. Suzuki, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of Putative Ribosome-Binding Factor A (Rbfa) From Human Mutochondrial Precursor
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_023233 (V122M, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_023233
V
122
M
RBFA_HUMAN
Polymorphism
748338
A
V
122
M
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RBFA (A:163-184)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RBFA
PS01319
Ribosome-binding factor A signature.
RBFA_HUMAN
163-184
1
A:163-184
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Exons
(5, 5)
Info
All Exons
Exon 1.3 (A:79-126)
Exon 1.4 (A:127-164)
Exon 1.5 (A:164-192)
Exon 1.6 (A:193-204)
Exon 1.7b (A:205-207)
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1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/1.6
5: Boundary 1.6/1.7b
6: Boundary 1.7b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000306735
1a
ENSE00001274338
chr18:
77794358-77794653
296
RBFA_HUMAN
1-53
53
0
-
-
1.2
ENST00000306735
2
ENSE00000670869
chr18:
77796668-77796710
43
RBFA_HUMAN
53-67
15
0
-
-
1.3
ENST00000306735
3
ENSE00000670868
chr18:
77797330-77797506
177
RBFA_HUMAN
68-126
59
1
A:79-126
48
1.4
ENST00000306735
4
ENSE00000950389
chr18:
77798505-77798617
113
RBFA_HUMAN
127-164
38
1
A:127-164
38
1.5
ENST00000306735
5
ENSE00000950390
chr18:
77802135-77802219
85
RBFA_HUMAN
164-192
29
1
A:164-192
29
1.6
ENST00000306735
6
ENSE00001651207
chr18:
77804212-77804285
74
RBFA_HUMAN
193-217
25
1
A:193-204
12
1.7b
ENST00000306735
7b
ENSE00001274318
chr18:
77805774-77810651
4878
RBFA_HUMAN
217-343
127
1
A:205-207
3
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2e7ga1 (A:86-201)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Alpha-lytic protease prodomain-like
(115)
Superfamily
:
Ribosome-binding factor A, RbfA
(7)
Family
:
Ribosome-binding factor A, RbfA
(6)
Protein domain
:
Ribosome-binding factor A, RbfA
(6)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2e7ga1
A:86-201
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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