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2E60
Asym. Unit
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Asym.Unit (530 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SURP1 DOMAIN IN SPLICING FACTOR, ARGININE/SERINE-RICH 8
Authors
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
25 Dec 06 (Deposition) - 26 Jun 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Nmr, Surp Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Rna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. He, Y. Muto, M. Inoue, T. Kigawa, M. Shirouzu, T. Terada, S. Yokoyama
Solution Structure Of The Surp1 Domain In Splicing Factor, Arginine/Serine-Rich 8
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SURP (A:30-72|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SURP
PS50128
SURP motif repeat profile.
SFSWA_HUMAN
211-253
459-499
1
A:30-72
-
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Exons
(4, 4)
Info
All Exons
Exon 1.3 (A:1-7)
Exon 1.4 (A:8-21)
Exon 1.5 (A:22-97)
Exon 1.6 (A:97-101)
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All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/1.6
5: Boundary 1.6/1.7
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261674
1
ENSE00001192361
chr12:
132195635-132195992
358
SFSWA_HUMAN
1-73
73
0
-
-
1.2
ENST00000261674
2
ENSE00000757545
chr12:
132198616-132198785
170
SFSWA_HUMAN
73-130
58
0
-
-
1.3
ENST00000261674
3
ENSE00000757546
chr12:
132199367-132199498
132
SFSWA_HUMAN
130-174
45
1
A:1-7
7
1.4
ENST00000261674
4
ENSE00000757547
chr12:
132203999-132204084
86
SFSWA_HUMAN
174-202
29
1
A:8-21
14
1.5
ENST00000261674
5
ENSE00000757548
chr12:
132209950-132210175
226
SFSWA_HUMAN
203-278
76
1
A:22-97
76
1.6
ENST00000261674
6
ENSE00000757549
chr12:
132211485-132211597
113
SFSWA_HUMAN
278-315
38
1
A:97-101
5
1.7
ENST00000261674
7
ENSE00000757550
chr12:
132212838-132212973
136
SFSWA_HUMAN
316-361
46
0
-
-
1.8
ENST00000261674
8
ENSE00001192354
chr12:
132237668-132237908
241
SFSWA_HUMAN
361-441
81
0
-
-
1.9
ENST00000261674
9
ENSE00000757553
chr12:
132238913-132239044
132
SFSWA_HUMAN
441-485
45
0
-
-
1.10
ENST00000261674
10
ENSE00000757554
chr12:
132239931-132240024
94
SFSWA_HUMAN
485-516
32
0
-
-
1.11
ENST00000261674
11
ENSE00000757555
chr12:
132241018-132241189
172
SFSWA_HUMAN
517-574
58
0
-
-
1.12
ENST00000261674
12
ENSE00000757556
chr12:
132249001-132249231
231
SFSWA_HUMAN
574-651
78
0
-
-
1.13
ENST00000261674
13
ENSE00001192340
chr12:
132250663-132250853
191
SFSWA_HUMAN
651-714
64
0
-
-
1.14
ENST00000261674
14
ENSE00001222569
chr12:
132262610-132262875
266
SFSWA_HUMAN
715-803
89
0
-
-
1.15
ENST00000261674
15
ENSE00001297565
chr12:
132271008-132271133
126
SFSWA_HUMAN
803-845
43
0
-
-
1.16
ENST00000261674
16
ENSE00001318201
chr12:
132281723-132281905
183
SFSWA_HUMAN
845-906
62
0
-
-
1.17
ENST00000261674
17
ENSE00001290833
chr12:
132283582-132283654
73
SFSWA_HUMAN
906-930
25
0
-
-
1.18
ENST00000261674
18
ENSE00001305898
chr12:
132283968-132284282
315
SFSWA_HUMAN
931-951
21
0
-
-
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SCOP Domains
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Pfam Domains
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