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2E5H
Asym. Unit
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Asym.Unit (491 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN ZINC FINGER CCHC-TYPE AND RNA BINDING MOTIF 1
Authors
:
H. Iibuchi, K. Tsuda, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
21 Dec 06 (Deposition) - 26 Jun 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Rrm Domain, Rbd, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Iibuchi, K. Tsuda, Y. Muto, M. Inoue, T. Kigawa, T. Terada, M. Shirouzu, S. Yokoyama
Solution Structure Of Rna Binding Domain In Zinc Finger Cchc-Type And Rna Binding Motif 1
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: RRM (A:10-87)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
ZCRB1_HUMAN
10-88
1
A:10-87
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:1-28)
Exon 1.3 (A:29-38)
Exon 1.4 (A:38-75)
Exon 1.5 (A:76-87)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000266529
1
ENSE00001158220
chr12:
42719932-42719726
207
ZCRB1_HUMAN
-
0
0
-
-
1.2
ENST00000266529
2
ENSE00000936817
chr12:
42717906-42717821
86
ZCRB1_HUMAN
1-28
28
1
A:1-28
28
1.3
ENST00000266529
3
ENSE00000998431
chr12:
42716248-42716220
29
ZCRB1_HUMAN
29-38
10
1
A:29-38
10
1.4
ENST00000266529
4
ENSE00000936818
chr12:
42711700-42711589
112
ZCRB1_HUMAN
38-75
38
1
A:38-75
38
1.5
ENST00000266529
5
ENSE00000936819
chr12:
42711249-42711142
108
ZCRB1_HUMAN
76-111
36
1
A:76-87
12
1.6
ENST00000266529
6
ENSE00000936820
chr12:
42707788-42707676
113
ZCRB1_HUMAN
112-149
38
0
-
-
1.7
ENST00000266529
7
ENSE00000936821
chr12:
42707567-42707492
76
ZCRB1_HUMAN
149-174
26
0
-
-
1.8
ENST00000266529
8
ENSE00001126898
chr12:
42707000-42705888
1113
ZCRB1_HUMAN
175-217
43
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2e5ha_ (A:)
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Protein Domains
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(
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RNA-binding domain, RBD
(289)
Family
:
automated matches
(67)
Protein domain
:
automated matches
(67)
Human (Homo sapiens) [TaxId: 9606]
(56)
1a
d2e5ha_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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