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2DWU
Biol. Unit 1
Info
Asym.Unit (162 KB)
Biol.Unit 1 (106 KB)
Biol.Unit 2 (106 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GLUTAMATE RACEMASE ISOFORM RACE1 FROM BACILLUS ANTHRACIS
Authors
:
S. Mehboob, B. D. Santarsiero, M. E. Johnson
Date
:
17 Aug 06 (Deposition) - 19 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Keywords
:
Racemase, Isomerase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. May, S. Mehboob, D. C. Mulhearn, Z. Wang, H. Yu, G. R. J. Thatcher, B. D. Santarsiero, M. E. Johnson, A. D. Mesecar
Structural And Functional Analysis Of Two Glutamate Racemas Isozymes From Bacillus Anthracis And Implications For Inhibitor Design
J. Mol. Biol. V. 371 1219 2007
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: D-GLUTAMIC ACID (DGLa)
1b: D-GLUTAMIC ACID (DGLb)
1c: D-GLUTAMIC ACID (DGLc)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
3c: POTASSIUM ION (Kc)
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No.
Name
Count
Type
Full Name
1
DGL
2
Ligand/Ion
D-GLUTAMIC ACID
2
GOL
3
Ligand/Ion
GLYCEROL
3
K
-1
Ligand/Ion
POTASSIUM ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC5 (SOFTWARE)
5: AC6 (SOFTWARE)
6: AC8 (SOFTWARE)
7: AC9 (SOFTWARE)
8: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR B:164 , HOH B:452 , THR C:242 , VAL C:265 , ASP C:266 , HOH C:313
BINDING SITE FOR RESIDUE K C 277
2
AC2
SOFTWARE
THR B:242 , VAL B:265 , ASP B:266 , HOH B:309 , TYR C:164 , HOH C:396
BINDING SITE FOR RESIDUE K B 277
3
AC3
SOFTWARE
TYR A:164 , THR A:242 , VAL A:265 , ASP A:266 , HOH A:320 , HOH A:394
BINDING SITE FOR RESIDUE K A 277
4
AC5
SOFTWARE
ASP B:14 , SER B:15 , PRO B:45 , TYR B:46 , GLY B:47 , CYS B:77 , ASN B:78 , THR B:79 , THR B:121 , CYS B:188 , THR B:189 , HOH B:281 , HOH B:282 , HOH B:283
BINDING SITE FOR RESIDUE DGL B 278
5
AC6
SOFTWARE
ASP A:14 , SER A:15 , PRO A:45 , TYR A:46 , GLY A:47 , CYS A:77 , ASN A:78 , THR A:79 , THR A:121 , CYS A:188 , THR A:189 , HOH A:280 , HOH A:281 , HOH A:282
BINDING SITE FOR RESIDUE DGL A 278
6
AC8
SOFTWARE
VAL B:9 , SER B:34 , LYS B:178 , GLU B:179 , ASP B:180 , HOH B:317 , HOH B:379 , HOH B:381 , HOH B:401 , HOH B:599
BINDING SITE FOR RESIDUE GOL B 279
7
AC9
SOFTWARE
VAL A:9 , SER A:34 , HIS A:144 , GLU A:179 , ASP A:180 , HOH A:301 , HOH A:324 , HOH A:658
BINDING SITE FOR RESIDUE GOL A 279
8
BC1
SOFTWARE
HIS B:101 , MET B:129 , LYS B:132 , ALA B:133 , GLU B:136 , HOH B:544
BINDING SITE FOR RESIDUE GOL B 280
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_2dwuA02 (A:99-211)
1b: CATH_2dwuB02 (B:99-211)
1c: CATH_2dwuA01 (A:5-98,A:212-269)
1d: CATH_2dwuB01 (B:5-98,B:212-270)
1e: CATH_2dwuC01 (C:5-98,C:212-270)
1f: CATH_2dwuC02 (C:99-211)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1860, no name defined]
(18)
Bacillus anthracis. Organism_taxid: 1392.
(2)
1a
2dwuA02
A:99-211
1b
2dwuB02
B:99-211
1c
2dwuA01
A:5-98,A:212-269
1d
2dwuB01
B:5-98,B:212-270
1e
2dwuC01
C:5-98,C:212-270
1f
2dwuC02
C:99-211
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (162 KB)
Header - Asym.Unit
Biol.Unit 1 (106 KB)
Header - Biol.Unit 1
Biol.Unit 2 (106 KB)
Header - Biol.Unit 2
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