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2DWP
Asym. Unit
Info
Asym.Unit (79 KB)
Biol.Unit 1 (145 KB)
Biol.Unit 2 (74 KB)
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(1)
Title
:
A PSEUDO SUBSTRATE COMPLEX OF 6-PHOSPHOFRUCTO-2-KINASE OF PFKFB
Authors
:
Y. H. Lee
Date
:
16 Aug 06 (Deposition) - 03 Jul 07 (Release) - 06 May 08 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Biol. Unit 2: A (1x)
Keywords
:
A Ternary Complex, Amppcp, Fructose-6-Phosphate, Transferase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Kim, M. Cavalier, M. R. El-Maghrabi, Y. H. Lee
A Direct Substrate-Substrate Interaction Found In The Kinase Domain Of The Bifunctional Enzyme, 6-Phosphofructo-2-Kinase/Fructose-2, 6- Bisphosphatase
J. Mol. Biol. V. 370 14 2007
(for further references see the
PDB file header
)
[
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]
Hetero Components
(3, 4)
Info
All Hetero Components
1a: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPa)
2a: FRUCTOSE-6-PHOSPHATE (F6Pa)
2b: FRUCTOSE-6-PHOSPHATE (F6Pb)
3a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
2
F6P
2
Ligand/Ion
FRUCTOSE-6-PHOSPHATE
3
MG
1
Ligand/Ion
MAGNESIUM ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:43 , GLY A:71 , ARG A:74 , ARG A:98 , ALA A:125 , THR A:126 , ARG A:132 , ARG A:189 , TYR A:193 , ACP A:700 , HOH A:755 , HOH A:769 , HOH A:775
BINDING SITE FOR RESIDUE F6P A 702
2
AC2
SOFTWARE
ARG A:252 , ILE A:264 , GLY A:265 , GLU A:322 , TYR A:333 , ARG A:347 , LYS A:351 , TYR A:362 , GLN A:388 , ARG A:392 , THR A:440 , HOH A:758 , HOH A:763 , HOH A:823 , HOH A:839 , HOH A:861 , HOH A:885
BINDING SITE FOR RESIDUE F6P A 720
3
AC3
SOFTWARE
THR A:48 , ACP A:700 , HOH A:743 , HOH A:913
BINDING SITE FOR RESIDUE MG A 701
4
AC4
SOFTWARE
PRO A:43 , ALA A:44 , ARG A:45 , GLY A:46 , LYS A:47 , THR A:48 , TYR A:49 , SER A:152 , ASN A:163 , GLU A:166 , VAL A:167 , LYS A:168 , PHE A:186 , VAL A:243 , TYR A:424 , MG A:701 , F6P A:702 , HOH A:1004
BINDING SITE FOR RESIDUE ACP A 700
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PG_MUTASE (A:250-259)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PG_MUTASE
PS00175
Phosphoglycerate mutase family phosphohistidine signature.
F263_HUMAN
251-260
1
A:250-259
[
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Exons
(13, 13)
Info
All Exons
Exon 1.3d (A:3-19)
Exon 1.4 (A:32-67)
Exon 1.5 (A:67-99)
Exon 1.6 (A:99-121)
Exon 1.7 (A:122-146)
Exon 1.8 (A:147-165)
Exon 1.9 (A:166-207)
Exon 1.10 (A:207-276)
Exon 1.11a (A:277-325)
Exon 1.12 (A:326-360)
Exon 1.13b (A:361-404)
Exon 1.14 (A:404-425)
Exon 1.15a (A:425-445)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.3d
02: Boundary 1.3d/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6
05: Boundary 1.6/1.7
06: Boundary 1.7/1.8
07: Boundary 1.8/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11a
10: Boundary 1.11a/1.12
11: Boundary 1.12/1.13b
12: Boundary 1.13b/1.14
13: Boundary 1.14/1.15a
14: Boundary 1.15a/1.18a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3d
ENST00000379775
3d
ENSE00001911115
chr10:
6244894-6245299
406
F263_HUMAN
1-26
26
1
A:3-19
17
1.4
ENST00000379775
4
ENSE00001636131
chr10:
6255586-6255711
126
F263_HUMAN
26-68
43
1
A:32-67
36
1.5
ENST00000379775
5
ENSE00001691710
chr10:
6257184-6257280
97
F263_HUMAN
68-100
33
1
A:67-99
33
1.6
ENST00000379775
6
ENSE00001625550
chr10:
6258088-6258154
67
F263_HUMAN
100-122
23
1
A:99-121
23
1.7
ENST00000379775
7
ENSE00001748558
chr10:
6258669-6258743
75
F263_HUMAN
123-147
25
1
A:122-146
25
1.8
ENST00000379775
8
ENSE00001650689
chr10:
6259098-6259154
57
F263_HUMAN
148-166
19
1
A:147-165
19
1.9
ENST00000379775
9
ENSE00001672633
chr10:
6261532-6261656
125
F263_HUMAN
167-208
42
1
A:166-207
42
1.10
ENST00000379775
10
ENSE00001727947
chr10:
6262621-6262828
208
F263_HUMAN
208-277
70
1
A:207-276
70
1.11a
ENST00000379775
11a
ENSE00001665756
chr10:
6263344-6263490
147
F263_HUMAN
278-326
49
1
A:277-325
49
1.12
ENST00000379775
12
ENSE00001758318
chr10:
6263604-6263708
105
F263_HUMAN
327-361
35
1
A:326-360
35
1.13b
ENST00000379775
13b
ENSE00001626155
chr10:
6264818-6264947
130
F263_HUMAN
362-405
44
1
A:361-404
44
1.14
ENST00000379775
14
ENSE00001771643
chr10:
6265921-6265983
63
F263_HUMAN
405-426
22
1
A:404-425
22
1.15a
ENST00000379775
15a
ENSE00001800461
chr10:
6266112-6266176
65
F263_HUMAN
426-447
22
1
A:425-445
21
1.18a
ENST00000379775
18a
ENSE00001683359
chr10:
6268155-6268328
174
F263_HUMAN
448-505
58
0
-
-
1.22g
ENST00000379775
22g
ENSE00001643662
chr10:
6274858-6277495
2638
F263_HUMAN
506-520
15
0
-
-
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_2dwpA01 (A:33-243)
2a: CATH_2dwpA02 (A:244-445)
View:
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Classes
(
)
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)
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2dwpA01
A:33-243
Homologous Superfamily
:
Phosphoglycerate mutase-like
(91)
Human (Homo sapiens)
(18)
2a
2dwpA02
A:244-445
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Atom Selection
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Protein
Nucleic
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Sidechain
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Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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Asym.Unit (79 KB)
Header - Asym.Unit
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