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Asym. Unit
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Asym.Unit (490 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SAM_PNT-DOMAIN OF ETS TRANSCRIPTION FACTOR PDEF (PROSTATE ETS)
Authors
:
A. K. Goroncy, M. Sato, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
14 Apr 06 (Deposition) - 14 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Cell-Free Protein Synthesis, Protein Regulation, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Goroncy, M. Sato, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Sam_pnt-Domain Of Ets Transcription Factor Pdef (Prostate Ets)
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: PNT (A:8-90)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PNT
PS51433
Pointed (PNT) domain profile.
SPDEF_HUMAN
129-213
1
A:8-90
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:1-23 (gaps))
Exon 1.3 (A:23-89)
Exon 1.4 (A:89-93 (gaps))
Exon 1.5 (A:94-96)
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1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
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4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000374037
1
ENSE00001308802
chr6:
34524091-34523706
386
SPDEF_HUMAN
-
0
0
-
-
1.2
ENST00000374037
2
ENSE00001462227
chr6:
34512261-34511797
465
SPDEF_HUMAN
1-146
146
1
A:1-23 (gaps)
68
1.3
ENST00000374037
3
ENSE00000849546
chr6:
34508958-34508761
198
SPDEF_HUMAN
146-212
67
1
A:23-89
67
1.4
ENST00000374037
4
ENSE00000849545
chr6:
34507339-34507292
48
SPDEF_HUMAN
212-228
17
1
A:89-93 (gaps)
10
1.5
ENST00000374037
5
ENSE00001311158
chr6:
34507173-34507027
147
SPDEF_HUMAN
228-277
50
1
A:94-96
3
1.6
ENST00000374037
6
ENSE00001462215
chr6:
34506229-34505579
651
SPDEF_HUMAN
277-335
59
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d2dkxa_ (A:)
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
SAM/Pointed domain
(61)
Family
:
automated matches
(20)
Protein domain
:
automated matches
(20)
Human (Homo sapiens) [TaxId: 9606]
(18)
1a
d2dkxa_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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