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2DG5
Biol. Unit 2
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Asym.Unit (189 KB)
Biol.Unit 1 (93 KB)
Biol.Unit 2 (94 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GAMMA-GLUTAMYL TRANSPEPTIDASE FROM ESCHERICHIA COLI IN COMPLEX WITH HYDROLYZED GLUTATHIONE
Authors
:
T. Okada, K. Wada, K. Fukuyama
Date
:
08 Mar 06 (Deposition) - 18 Apr 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Gamma-Glutamyltransferase, Ggt, Gamma-Gt, Glutathione, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Okada, H. Suzuki, K. Wada, H. Kumagai, K. Fukuyama
Crystal Structures Of Gamma-Glutamyltranspeptidase From Escherichia Coli, A Key Enzyme In Glutathione Metabolism, And Its Reaction Intermediate.
Proc. Natl. Acad. Sci. Usa V. 103 6471 2006
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: GLUTAMIC ACID (GLUa)
2b: GLUTAMIC ACID (GLUb)
3a: GLYCEROL (GOLa)
4a: SELENOMETHIONINE (MSEa)
4aa: SELENOMETHIONINE (MSEaa)
4ab: SELENOMETHIONINE (MSEab)
4ac: SELENOMETHIONINE (MSEac)
4ad: SELENOMETHIONINE (MSEad)
4ae: SELENOMETHIONINE (MSEae)
4af: SELENOMETHIONINE (MSEaf)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
4u: SELENOMETHIONINE (MSEu)
4v: SELENOMETHIONINE (MSEv)
4w: SELENOMETHIONINE (MSEw)
4x: SELENOMETHIONINE (MSEx)
4y: SELENOMETHIONINE (MSEy)
4z: SELENOMETHIONINE (MSEz)
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No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
GLU
1
Mod. Amino Acid
GLUTAMIC ACID
3
GOL
-1
Ligand/Ion
GLYCEROL
4
MSE
16
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
ASP D:569 , SER D:572 , ASP D:575 , HOH D:1864 , HOH D:1865 , HOH D:1866 , HOH D:1867
BINDING SITE FOR RESIDUE CA D 702
2
AC4
SOFTWARE
ARG C:114 , THR D:391 , ASN D:411 , GLN D:430 , ASP D:433 , TYR D:444 , SER D:462 , SER D:463 , MSE D:464 , GLY D:483 , GLY D:484 , HOH D:1058 , HOH D:1669
BINDING SITE FOR RESIDUE GLU D 602
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_GLU_TRANSPEPTIDASE (D:391-415)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_GLU_TRANSPEPTIDASE
PS00462
Gamma-glutamyltranspeptidase signature.
GGT_ECOLI
391-415
1
-
D:391-415
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2dg5_1 (A:37-387,B:391-580)
1b: SCOP_d2dg5_2 (C:37-387,D:391-580)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Gamma-glutamyltranspeptidase-like
(11)
Protein domain
:
Gamma-glutamyltranspeptidase, GGT
(8)
Escherichia coli [TaxId: 562]
(7)
1a
d2dg5.1
A:37-387,B:391-580
1b
d2dg5.2
C:37-387,D:391-580
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CATH Domains
(0, 0)
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Pfam Domains
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Chain C
Chain D
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (189 KB)
Header - Asym.Unit
Biol.Unit 1 (93 KB)
Header - Biol.Unit 1
Biol.Unit 2 (94 KB)
Header - Biol.Unit 2
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