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2DC5
Asym. Unit
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Asym.Unit (91 KB)
Biol.Unit 1 (86 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE GLUTATHIONE S-TRANSFERASE, MU7 (GSTM7) AT 1.6 A RESOLUTION
Authors
:
S. Kamo, S. Kishishita, K. Murayama, M. Shirouzu, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 Dec 05 (Deposition) - 28 Jun 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Structural Genomics, Glutathione S-Transferase, Riken Structural Genomics/Proteomics Initiative, Rsgi, Nppsfa, National Project On Protein Structural And Functional Analyses
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Kamo, S. Kishishita, K. Murayama, M. Shirouzu, S. Yokoyama
Crystal Structure Of Mouse Glutathione S-Transferase, Mu7 (Gstm7) At 1. 6 A Resolution
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 20)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
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No.
Name
Count
Type
Full Name
1
MSE
20
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:8-95,B:8-95)
2: GST_CTER (A:97-215,B:97-215)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTM7_MOUSE
1-88
2
A:8-95
B:8-95
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTM7_MOUSE
90-208
2
A:97-215
B:97-215
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2dc5a2 (A:93-225)
1b: SCOP_d2dc5b2 (B:93-225)
2a: SCOP_d2dc5a1 (A:8-92)
2b: SCOP_d2dc5b1 (B:8-92)
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
automated matches
(86)
Protein domain
:
automated matches
(86)
Mouse (Mus musculus) [TaxId: 10090]
(1)
1a
d2dc5a2
A:93-225
1b
d2dc5b2
B:93-225
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
automated matches
(347)
Protein domain
:
automated matches
(347)
Mouse (Mus musculus) [TaxId: 10090]
(11)
2a
d2dc5a1
A:8-92
2b
d2dc5b1
B:8-92
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2dc5A01 (A:9-93,A:199-225)
1b: CATH_2dc5B01 (B:9-93,B:199-225)
2a: CATH_2dc5A02 (A:94-198)
2b: CATH_2dc5B02 (B:94-198)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
House mouse (Mus musculus)
(21)
1a
2dc5A01
A:9-93,A:199-225
1b
2dc5B01
B:9-93,B:199-225
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
[code=1.20.1050.10, no name defined]
(249)
House mouse (Mus musculus)
(17)
2a
2dc5A02
A:94-198
2b
2dc5B02
B:94-198
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Pfam Domains
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Asymmetric Unit 1
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