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2DAT
Asym. Unit
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Asym.Unit (660 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE BROMODOMAIN OF HUMAN SWI/SNF RELATED MATRIX ASSOCIATED ACTIN DEPENDENT REGULATOR OF CROMATIN SUBFAMILY A MEMBER 2
Authors
:
M. Yoneyama, T. Kigawa, K. Saito, N. Tochio, S. Koshiba, M. Inoue, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
14 Dec 05 (Deposition) - 02 Jan 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Bromodomain, All Alpha Protein, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transcription
(Keyword Search:
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Reference
:
M. Yoneyama, T. Kigawa, K. Saito, N. Tochio, S. Koshiba, M. Inoue, S. Yokoyama
Solution Structure Of The Bromodomain Of Human Swi/Snf Related Matrix Associated Actin Dependent Regulator Of Cromatin Subfamily A Member 2
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: BROMODOMAIN_2 (A:32-102)
2: BROMODOMAIN_1 (A:37-94)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BROMODOMAIN_2
PS50014
Bromodomain profile.
SMCA2_HUMAN
1419-1489
1
A:32-102
2
BROMODOMAIN_1
PS00633
Bromodomain signature.
SMCA2_HUMAN
1424-1481
1
A:37-94
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Exons
(7, 7)
Info
All Exons
Exon 1.31 (A:1-4)
Exon 1.37a (A:5-30 (gaps))
Exon 1.38 (A:31-31)
Exon 1.39 (A:31-66)
Exon 1.40b (A:67-100)
Exon 1.41b (A:101-117)
Exon 1.42a (A:118-123 (gaps))
View:
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All Exon Boundaries
1: Boundary 1.30/1.31
2: Boundary 1.31/1.37a
3: Boundary 1.37a/1.38
4: Boundary 1.38/1.39
5: Boundary 1.39/1.40b
6: Boundary 1.40b/1.41b
7: Boundary 1.41b/1.42a
8: Boundary 1.42a/1.43h
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4
ENST00000382203
4
ENSE00001491213
chr9:
2021945-2022117
173
SMCA2_HUMAN
-
0
0
-
-
1.5b
ENST00000382203
5b
ENSE00002184505
chr9:
2028987-2029247
261
SMCA2_HUMAN
1-75
75
0
-
-
1.7
ENST00000382203
7
ENSE00001713568
chr9:
2032952-2033081
130
SMCA2_HUMAN
76-119
44
0
-
-
1.8c
ENST00000382203
8c
ENSE00001641509
chr9:
2039466-2039900
435
SMCA2_HUMAN
119-264
146
0
-
-
1.9
ENST00000382203
9
ENSE00001784172
chr9:
2047229-2047484
256
SMCA2_HUMAN
264-349
86
0
-
-
1.10
ENST00000382203
10
ENSE00001797754
chr9:
2054597-2054723
127
SMCA2_HUMAN
349-391
43
0
-
-
1.11
ENST00000382203
11
ENSE00001618959
chr9:
2056672-2056845
174
SMCA2_HUMAN
392-449
58
0
-
-
1.12
ENST00000382203
12
ENSE00001710512
chr9:
2058291-2058464
174
SMCA2_HUMAN
450-507
58
0
-
-
1.13b
ENST00000382203
13b
ENSE00001640446
chr9:
2060816-2060986
171
SMCA2_HUMAN
508-564
57
0
-
-
1.14
ENST00000382203
14
ENSE00001798327
chr9:
2070418-2070471
54
SMCA2_HUMAN
565-582
18
0
-
-
1.15
ENST00000382203
15
ENSE00001748584
chr9:
2073212-2073342
131
SMCA2_HUMAN
583-626
44
0
-
-
1.16
ENST00000382203
16
ENSE00001778439
chr9:
2073566-2073623
58
SMCA2_HUMAN
626-645
20
0
-
-
1.17
ENST00000382203
17
ENSE00001683881
chr9:
2076229-2076329
101
SMCA2_HUMAN
646-679
34
0
-
-
1.18
ENST00000382203
18
ENSE00001768957
chr9:
2077629-2077776
148
SMCA2_HUMAN
679-728
50
0
-
-
1.19
ENST00000382203
19
ENSE00001655472
chr9:
2081832-2081995
164
SMCA2_HUMAN
729-783
55
0
-
-
1.20
ENST00000382203
20
ENSE00001614170
chr9:
2083347-2083413
67
SMCA2_HUMAN
783-805
23
0
-
-
1.21
ENST00000382203
21
ENSE00001759748
chr9:
2084086-2084196
111
SMCA2_HUMAN
806-842
37
0
-
-
1.22
ENST00000382203
22
ENSE00001690900
chr9:
2086829-2087071
243
SMCA2_HUMAN
843-923
81
0
-
-
1.23
ENST00000382203
23
ENSE00001735544
chr9:
2088500-2088613
114
SMCA2_HUMAN
924-961
38
0
-
-
1.24
ENST00000382203
24
ENSE00001627711
chr9:
2096657-2096764
108
SMCA2_HUMAN
962-997
36
0
-
-
1.25
ENST00000382203
25
ENSE00001602679
chr9:
2097385-2097471
87
SMCA2_HUMAN
998-1026
29
0
-
-
1.26
ENST00000382203
26
ENSE00001776737
chr9:
2101570-2101616
47
SMCA2_HUMAN
1027-1042
16
0
-
-
1.27
ENST00000382203
27
ENSE00001786095
chr9:
2104003-2104169
167
SMCA2_HUMAN
1042-1098
57
0
-
-
1.28
ENST00000382203
28
ENSE00001731542
chr9:
2110254-2110417
164
SMCA2_HUMAN
1098-1152
55
0
-
-
1.29
ENST00000382203
29
ENSE00001757188
chr9:
2115822-2116049
228
SMCA2_HUMAN
1153-1228
76
0
-
-
1.30
ENST00000382203
30
ENSE00001650940
chr9:
2119458-2119535
78
SMCA2_HUMAN
1229-1254
26
0
-
-
1.31
ENST00000382203
31
ENSE00001743929
chr9:
2123719-2123937
219
SMCA2_HUMAN
1255-1327
73
1
A:1-4
4
1.37a
ENST00000382203
37a
ENSE00001764504
chr9:
2161686-2161903
218
SMCA2_HUMAN
1328-1400
73
1
A:5-30 (gaps)
33
1.38
ENST00000382203
38
ENSE00000682837
chr9:
2170419-2170472
54
SMCA2_HUMAN
1400-1418
19
1
A:31-31
1
1.39
ENST00000382203
39
ENSE00001750260
chr9:
2181571-2181676
106
SMCA2_HUMAN
1418-1453
36
1
A:31-66
36
1.40b
ENST00000382203
40b
ENSE00001611527
chr9:
2182141-2182242
102
SMCA2_HUMAN
1454-1487
34
1
A:67-100
34
1.41b
ENST00000382203
41b
ENSE00002176465
chr9:
2186096-2186228
133
SMCA2_HUMAN
1488-1532
45
1
A:101-117
17
1.42a
ENST00000382203
42a
ENSE00001347320
chr9:
2191266-2191408
143
SMCA2_HUMAN
1532-1579
48
1
A:118-123 (gaps)
9
1.43h
ENST00000382203
43h
ENSE00001088915
chr9:
2192704-2193624
921
SMCA2_HUMAN
1580-1590
11
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d2data_ (A:)
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Class
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All alpha proteins
(14657)
Fold
:
Bromodomain-like
(339)
Superfamily
:
Bromodomain
(203)
Family
:
automated matches
(169)
Protein domain
:
automated matches
(169)
Human (Homo sapiens) [TaxId: 9606]
(162)
1a
d2data_
A:
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Chain A
Asymmetric Unit 1
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