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2D86
Asym. Unit
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Asym.Unit (758 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE CH DOMAIN FROM HUMAN VAV-3 PROTEIN
Authors
:
T. Tomizawa, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
02 Dec 05 (Deposition) - 02 Dec 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
All Alpha, Calponin Homology Domain, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Tomizawa, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama
Solution Structure Of The Ch Domain From Human Vav-3 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CH (A:8-126)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CH
PS50021
Calponin homology domain profile.
VAV3_HUMAN
1-119
1
A:8-126
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Exons
(4, 4)
Info
All Exons
Exon 1.1a (A:8-75)
Exon 1.3 (A:76-114)
Exon 1.7 (A:115-134)
Exon 1.9 (A:134-143)
View:
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All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.3
3: Boundary 1.3/1.7
4: Boundary 1.7/1.9
5: Boundary 1.9/1.10
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000370056
1a
ENSE00001894713
chr1:
108507766-108507288
479
VAV3_HUMAN
1-68
68
1
A:8-75
68
1.3
ENST00000370056
3
ENSE00001671942
chr1:
108417639-108417523
117
VAV3_HUMAN
69-107
39
1
A:76-114
39
1.7
ENST00000370056
7
ENSE00001261464
chr1:
108322114-108322056
59
VAV3_HUMAN
108-127
20
1
A:115-134
20
1.9
ENST00000370056
9
ENSE00001261458
chr1:
108319918-108319853
66
VAV3_HUMAN
127-149
23
1
A:134-143
10
1.10
ENST00000370056
10
ENSE00000998251
chr1:
108315465-108315357
109
VAV3_HUMAN
149-185
37
0
-
-
1.11b
ENST00000370056
11b
ENSE00000998263
chr1:
108313350-108313258
93
VAV3_HUMAN
186-216
31
0
-
-
1.12
ENST00000370056
12
ENSE00001261509
chr1:
108311131-108311063
69
VAV3_HUMAN
217-239
23
0
-
-
1.13b
ENST00000370056
13b
ENSE00000998260
chr1:
108309172-108309069
104
VAV3_HUMAN
240-274
35
0
-
-
1.14
ENST00000370056
14
ENSE00000998254
chr1:
108307797-108307698
100
VAV3_HUMAN
274-307
34
0
-
-
1.15
ENST00000370056
15
ENSE00000998258
chr1:
108303501-108303406
96
VAV3_HUMAN
308-339
32
0
-
-
1.16
ENST00000370056
16
ENSE00000998243
chr1:
108299951-108299883
69
VAV3_HUMAN
340-362
23
0
-
-
1.17
ENST00000370056
17
ENSE00000998240
chr1:
108298135-108298049
87
VAV3_HUMAN
363-391
29
0
-
-
1.18
ENST00000370056
18
ENSE00000998242
chr1:
108293824-108293739
86
VAV3_HUMAN
392-420
29
0
-
-
1.19a
ENST00000370056
19a
ENSE00000998262
chr1:
108292216-108292084
133
VAV3_HUMAN
420-464
45
0
-
-
1.20
ENST00000370056
20
ENSE00000998256
chr1:
108291699-108291590
110
VAV3_HUMAN
465-501
37
0
-
-
1.21
ENST00000370056
21
ENSE00000998249
chr1:
108247683-108247582
102
VAV3_HUMAN
501-535
35
0
-
-
1.22
ENST00000370056
22
ENSE00000998255
chr1:
108247272-108247172
101
VAV3_HUMAN
535-569
35
0
-
-
1.23c
ENST00000370056
23c
ENSE00000998248
chr1:
108231028-108231003
26
VAV3_HUMAN
569-577
9
0
-
-
1.25
ENST00000370056
25
ENSE00000998266
chr1:
108226155-108226110
46
VAV3_HUMAN
578-593
16
0
-
-
1.30
ENST00000370056
30
ENSE00000912776
chr1:
108185377-108185241
137
VAV3_HUMAN
593-638
46
0
-
-
1.31b
ENST00000370056
31b
ENSE00000958099
chr1:
108160254-108160189
66
VAV3_HUMAN
639-660
22
0
-
-
1.32a
ENST00000370056
32a
ENSE00000958100
chr1:
108152587-108152553
35
VAV3_HUMAN
661-672
12
0
-
-
1.34b
ENST00000370056
34b
ENSE00000958101
chr1:
108145785-108145669
117
VAV3_HUMAN
672-711
40
0
-
-
1.35
ENST00000370056
35
ENSE00000998246
chr1:
108145106-108145019
88
VAV3_HUMAN
711-740
30
0
-
-
1.36b
ENST00000370056
36b
ENSE00000998252
chr1:
108138963-108138834
130
VAV3_HUMAN
741-784
44
0
-
-
1.38
ENST00000370056
38
ENSE00000998244
chr1:
108116820-108116669
152
VAV3_HUMAN
784-834
51
0
-
-
1.39f
ENST00000370056
39f
ENSE00001902342
chr1:
108115994-108113782
2213
VAV3_HUMAN
835-847
13
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2d86a_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
CH domain-like
(55)
Superfamily
:
Calponin-homology domain, CH-domain
(53)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(23)
1a
d2d86a_
A:
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CATH Domains
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