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2CXT
Asym. Unit
Info
Asym.Unit (202 KB)
Biol.Unit 1 (197 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE AMF / F6P COMPLEX
Authors
:
N. Tanaka, A. Haga, N. Naba, K. Shiraiwa, Y. Kusakabe, K. Hashimoto, T. F H. Nagase, A. Raz, K. T. Nakamura
Date
:
30 Jun 05 (Deposition) - 23 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Tanaka, A. Haga, N. Naba, K. Shiraiwa, Y. Kusakabe, K. Hashimoto, T. Funasaka, H. Nagase, A. Raz, K. T. Nakamura
Crystal Structures Of Mouse Autocrine Motility Factor In Complex With Carbohydrate Phosphate Inhibitors Provide Insight Into Structure-Activity Relationship Of The Inhibitors
J. Mol. Biol. V. 356 312 2006
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: FRUCTOSE-6-PHOSPHATE (F6Pa)
1b: FRUCTOSE-6-PHOSPHATE (F6Pb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
F6P
2
Ligand/Ion
FRUCTOSE-6-PHOSPHATE
2
GOL
4
Ligand/Ion
GLYCEROL
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:157 , GLY A:159 , SER A:160 , SER A:210 , LYS A:211 , THR A:212 , THR A:215 , GLN A:354 , GLU A:358 , VAL A:515 , LYS A:519 , HOH A:1706 , HOH A:1773 , HOH A:1783 , HOH A:1810 , HOH A:1821 , HOH A:1963 , GLN B:388 , HIS B:389
BINDING SITE FOR RESIDUE F6P A 1601
2
AC2
SOFTWARE
GLN A:388 , HIS A:389 , ILE B:157 , GLY B:159 , SER B:160 , SER B:210 , LYS B:211 , THR B:212 , THR B:215 , GLN B:354 , GLU B:358 , VAL B:515 , LYS B:519 , HOH B:2636 , HOH B:2685 , HOH B:2719 , HOH B:2764 , HOH B:2775 , HOH B:2899
BINDING SITE FOR RESIDUE F6P B 2601
3
AC3
SOFTWARE
ASP A:140 , TRP A:141 , LYS A:142 , LYS A:241 , HOH A:2066
BINDING SITE FOR RESIDUE GOL A 1701
4
AC4
SOFTWARE
ILE A:549 , ARG A:553 , GLY B:419 , HIS B:422 , LYS B:423 , LEU B:426 , HOH B:2692 , HOH B:2715
BINDING SITE FOR RESIDUE GOL B 1702
5
AC5
SOFTWARE
ARG B:135 , TRP B:141 , LYS B:142 , LYS B:241 , HOH B:2942
BINDING SITE FOR RESIDUE GOL B 1703
6
AC6
SOFTWARE
GLY A:419 , HIS A:422 , LYS A:423 , LEU A:426 , HOH A:1822 , HOH A:1881 , ARG B:553
BINDING SITE FOR RESIDUE GOL A 1704
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: P_GLUCOSE_ISOMERASE_3 (A:7-553,B:7-553)
2: P_GLUCOSE_ISOMERASE_1 (A:268-281,B:268-281)
3: P_GLUCOSE_ISOMERASE_2 (A:502-519,B:502-519)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
P_GLUCOSE_ISOMERASE_3
PS51463
Glucose-6-phosphate isomerase family profile.
G6PI_MOUSE
7-553
2
A:7-553
B:7-553
2
P_GLUCOSE_ISOMERASE_1
PS00765
Phosphoglucose isomerase signature 1.
G6PI_MOUSE
268-281
2
A:268-281
B:268-281
3
P_GLUCOSE_ISOMERASE_2
PS00174
Phosphoglucose isomerase signature 2.
G6PI_MOUSE
502-519
2
A:502-519
B:502-519
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2cxta_ (A:)
1b: SCOP_d2cxtb_ (B:)
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Classes
(
)
(
)
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)
(
)
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(
)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
SIS domain
(85)
Superfamily
:
SIS domain
(85)
Family
:
Phosphoglucose isomerase, PGI
(37)
Protein domain
:
automated matches
(13)
Mouse (Mus musculus) [TaxId: 10090]
(9)
1a
d2cxta_
A:
1b
d2cxtb_
B:
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_2cxtA02 (A:100-294)
1b: CATH_2cxtA01 (A:1-99,A:295-515)
1c: CATH_2cxtB01 (B:1-99,B:295-515)
1d: CATH_2cxtB02 (B:100-294)
2a: CATH_2cxtA03 (A:516-556)
2b: CATH_2cxtB03 (B:516-556)
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)
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)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Glucose-6-phosphate isomerase like protein; domain 1
(105)
House mouse (Mus musculus)
(12)
1a
2cxtA02
A:100-294
1b
2cxtA01
A:1-99,A:295-515
1c
2cxtB01
B:1-99,B:295-515
1d
2cxtB02
B:100-294
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Phosphoglucose isomerase, C-terminal domain
(32)
Homologous Superfamily
:
[code=1.10.1390.10, no name defined]
(32)
House mouse (Mus musculus)
(12)
2a
2cxtA03
A:516-556
2b
2cxtB03
B:516-556
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (202 KB)
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