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2CWB
Asym. Unit
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Asym.Unit (129 KB)
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Models
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Title
:
SOLUTION STRUCTURE OF THE UBIQUITIN-ASSOCIATED DOMAIN OF HUMAN BMSC-UBP AND ITS COMPLEX WITH UBIQUITIN
Authors
:
Y. G. Chang, A. X. Song, Y. G. Gao, Y. H. Shi, X. J. Lin, X. T. Cao, D. H. Lin, H. Y. Hu
Date
:
17 Jun 05 (Deposition) - 06 Jun 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Keywords
:
Helical Bundle, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. G. Chang, A. X. Song, Y. G. Gao, Y. H. Shi, X. J. Lin, X. T. Cao, D. H. Lin, H. Y. Hu
Solution Structure Of The Ubiquitin-Associated Domain Of Human Bmsc-Ubp And Its Complex With Ubiquitin.
Protein Sci. V. 15 1248 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: UBA (A:64-105)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UBA
PS50030
Ubiquitin-associated domain (UBA) profile.
UBL7_HUMAN
333-377
1
A:64-105
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Exons
(1, 1)
Info
All Exons
Exon 1.11 (A:64-108)
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All Exon Boundaries
1: Boundary 1.10/1.11
2: Boundary 1.11/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000395081
1b
ENSE00001520566
chr15:
74753519-74753378
142
UBL7_HUMAN
-
0
0
-
-
1.2
ENST00000395081
2
ENSE00001259805
chr15:
74751237-74751025
213
UBL7_HUMAN
1-62
62
0
-
-
1.3
ENST00000395081
3
ENSE00000931909
chr15:
74749012-74748893
120
UBL7_HUMAN
62-102
41
0
-
-
1.4
ENST00000395081
4
ENSE00000931908
chr15:
74744719-74744637
83
UBL7_HUMAN
102-129
28
0
-
-
1.5
ENST00000395081
5
ENSE00000931907
chr15:
74743861-74743777
85
UBL7_HUMAN
130-158
29
0
-
-
1.6
ENST00000395081
6
ENSE00000931906
chr15:
74743200-74743143
58
UBL7_HUMAN
158-177
20
0
-
-
1.7
ENST00000395081
7
ENSE00000931905
chr15:
74742410-74742277
134
UBL7_HUMAN
177-222
46
0
-
-
1.8
ENST00000395081
8
ENSE00000931904
chr15:
74742016-74741967
50
UBL7_HUMAN
222-238
17
0
-
-
1.9
ENST00000395081
9
ENSE00000931903
chr15:
74741694-74741527
168
UBL7_HUMAN
239-294
56
0
-
-
1.10
ENST00000395081
10
ENSE00000931902
chr15:
74740941-74740819
123
UBL7_HUMAN
295-335
41
0
-
-
1.11
ENST00000395081
11
ENSE00001110742
chr15:
74738568-74738318
251
UBL7_HUMAN
336-380
45
1
A:64-108
45
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SCOP Domains
(1, 1)
Info
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1a: SCOP_d2cwba_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
RuvA C-terminal domain-like
(106)
Superfamily
:
UBA-like
(64)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Streptococcus sp. [TaxId: 1306]
(2)
1a
d2cwba_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (129 KB)
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