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2CT9
Asym. Unit
Info
Asym.Unit (72 KB)
Biol.Unit 1 (34 KB)
Biol.Unit 2 (35 KB)
Biol.Unit 3 (67 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF CALCINEURIN B HOMOLOGOUS PROEIN 1 (CHP1)
Authors
:
Y. Naoe, K. Arita, H. Hashimoto, H. Kanazawa, M. Sato, T. Shimizu
Date
:
23 May 05 (Deposition) - 05 Jul 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Ef-Hand, Calcium Binding Protein, Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
Y. Naoe, K. Arita, H. Hashimoto, H. Kanazawa, M. Sato, T. Shimizu
Structural Characterization Of Calcineurin B Homologous Protein 1
J. Biol. Chem. V. 280 32372 2005
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:123 , ASP A:125 , ASP A:127 , LYS A:129 , GLU A:134 , HOH A:325
BINDING SITE FOR RESIDUE CA A 301
2
AC2
SOFTWARE
ASP A:164 , ASP A:166 , ASP A:168 , ALA A:170 , GLU A:175 , HOH A:343
BINDING SITE FOR RESIDUE CA A 302
3
AC3
SOFTWARE
ASP B:123 , ASP B:125 , ASP B:127 , LYS B:129 , GLU B:134 , HOH B:375
BINDING SITE FOR RESIDUE CA B 303
4
AC4
SOFTWARE
ASP B:164 , ASP B:166 , ASP B:168 , ALA B:170 , GLU B:175 , HOH B:344
BINDING SITE FOR RESIDUE CA B 304
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:26-61,B:26-61|A:110-145,B:110-14...)
2: EF_HAND_1 (A:123-135,B:123-135)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CHP1_RAT
26-61
110-145
151-186
6
A:26-61
B:26-61
A:110-145
B:110-145
A:151-186
B:151-186
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CHP1_RAT
123-135
2
A:123-135
B:123-135
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Exons
(7, 14)
Info
All Exons
Exon 1.1 (A:8-23 | B:3-23)
Exon 1.2 (A:23-47 | B:23-47)
Exon 1.3 (A:47-74 | B:47-74)
Exon 1.4 (A:74-117 (gaps) | B:74-117 (gaps))
Exon 1.5 (A:117-137 | B:117-137)
Exon 1.6 (A:138-178 | B:138-178)
Exon 1.7 (A:179-195 | B:179-195)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5
6: Boundary 1.5/1.6
7: Boundary 1.6/1.7
8: Boundary 1.7/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000056405
1
ENSRNOE00000331081
chr3:
106066389-106066590
202
CHP1_RAT
1-23
23
2
A:8-23
B:3-23
16
21
1.2
ENSRNOT00000056405
2
ENSRNOE00000044975
chr3:
106077844-106077916
73
CHP1_RAT
23-47
25
2
A:23-47
B:23-47
25
25
1.3
ENSRNOT00000056405
3
ENSRNOE00000045069
chr3:
106083190-106083270
81
CHP1_RAT
47-74
28
2
A:47-74
B:47-74
28
28
1.4
ENSRNOT00000056405
4
ENSRNOE00000045174
chr3:
106087793-106087920
128
CHP1_RAT
74-117
44
2
A:74-117 (gaps)
B:74-117 (gaps)
44
44
1.5
ENSRNOT00000056405
5
ENSRNOE00000045275
chr3:
106096017-106096078
62
CHP1_RAT
117-137
21
2
A:117-137
B:117-137
21
21
1.6
ENSRNOT00000056405
6
ENSRNOE00000045396
chr3:
106099224-106099346
123
CHP1_RAT
138-178
41
2
A:138-178
B:138-178
41
41
1.7
ENSRNOT00000056405
7
ENSRNOE00000380968
chr3:
106099792-106101626
1835
CHP1_RAT
179-195
17
2
A:179-195
B:179-195
17
17
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SCOP Domains
(0, 0)
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2ct9A00 (A:8-203)
1b: CATH_2ct9B00 (B:3-203)
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Classes
(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Norway rat (Rattus norvegicus)
(37)
1a
2ct9A00
A:8-203
1b
2ct9B00
B:3-203
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (72 KB)
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