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2CT7
Asym. Unit
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Asym.Unit (454 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE IBR DOMAIN OF THE RING FINGER PROTEIN 31 PROTEIN
Authors
:
K. Miyamoto, S. Koshiba, T. Tomizawa, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
23 May 05 (Deposition) - 23 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Ring Finger Protein 31, Ibr, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
K. Miyamoto, S. Koshiba, T. Tomizawa, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Ibr Domain Of The Ring Finger Protein 31 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
2
Ligand/Ion
ZINC ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:28 , CYS A:31 , CYS A:46 , CYS A:49
BINDING SITE FOR RESIDUE ZN A 201
2
AC2
SOFTWARE
CYS A:54 , CYS A:57 , HIS A:65 , CYS A:70
BINDING SITE FOR RESIDUE ZN A 401
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZF_RING_1 (A:81-82)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZF_RING_1
PS00518
Zinc finger RING-type signature.
RNF31_HUMAN
893-902
1
A:81-82
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Exons
(6, 6)
Info
All Exons
Exon 1.13 (A:1-4)
Exon 1.14 (A:5-30)
Exon 1.15 (A:31-60)
Exon 1.16a (A:61-80)
Exon 1.17 (A:81-82)
Exon 1.19 (A:83-86)
View:
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All Exon Boundaries
1: Boundary 1.12/1.13
2: Boundary 1.13/1.14
3: Boundary 1.14/1.15
4: Boundary 1.15/1.16a
5: Boundary 1.16a/1.17
6: Boundary 1.17/1.18
7: Boundary 1.18/1.19
8: Boundary 1.19/1.20
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000324103
1c
ENSE00001872297
chr14:
24616739-24617099
361
RNF31_HUMAN
1-64
64
0
-
-
1.2c
ENST00000324103
2c
ENSE00001361365
chr14:
24617185-24617331
147
RNF31_HUMAN
65-113
49
0
-
-
1.3
ENST00000324103
3
ENSE00001032020
chr14:
24617467-24617622
156
RNF31_HUMAN
114-165
52
0
-
-
1.5
ENST00000324103
5
ENSE00001361361
chr14:
24617851-24617910
60
RNF31_HUMAN
166-185
20
0
-
-
1.6
ENST00000324103
6
ENSE00001032013
chr14:
24618010-24618085
76
RNF31_HUMAN
186-211
26
0
-
-
1.7
ENST00000324103
7
ENSE00001032019
chr14:
24618615-24618792
178
RNF31_HUMAN
211-270
60
0
-
-
1.8
ENST00000324103
8
ENSE00001032022
chr14:
24619270-24619657
388
RNF31_HUMAN
270-399
130
0
-
-
1.9
ENST00000324103
9
ENSE00001032016
chr14:
24619807-24620097
291
RNF31_HUMAN
400-496
97
0
-
-
1.10
ENST00000324103
10
ENSE00000889364
chr14:
24620340-24620588
249
RNF31_HUMAN
497-579
83
0
-
-
1.11a
ENST00000324103
11a
ENSE00001617333
chr14:
24620694-24620879
186
RNF31_HUMAN
580-641
62
0
-
-
1.12
ENST00000324103
12
ENSE00001780213
chr14:
24620995-24621201
207
RNF31_HUMAN
642-710
69
0
-
-
1.13
ENST00000324103
13
ENSE00001662886
chr14:
24624366-24624539
174
RNF31_HUMAN
711-768
58
1
A:1-4
4
1.14
ENST00000324103
14
ENSE00001793277
chr14:
24624623-24624721
99
RNF31_HUMAN
769-801
33
1
A:5-30
26
1.15
ENST00000324103
15
ENSE00001759230
chr14:
24624812-24624901
90
RNF31_HUMAN
802-831
30
1
A:31-60
30
1.16a
ENST00000324103
16a
ENSE00001755858
chr14:
24626499-24626613
115
RNF31_HUMAN
832-870
39
1
A:61-80
20
1.17
ENST00000324103
17
ENSE00001772571
chr14:
24626729-24626847
119
RNF31_HUMAN
870-909
40
1
A:81-82
2
1.18
ENST00000324103
18
ENSE00001787690
chr14:
24627107-24627220
114
RNF31_HUMAN
910-947
38
0
-
-
1.19
ENST00000324103
19
ENSE00001696970
chr14:
24627351-24627408
58
RNF31_HUMAN
948-967
20
1
A:83-86
4
1.20
ENST00000324103
20
ENSE00001639274
chr14:
24629073-24629169
97
RNF31_HUMAN
967-999
33
0
-
-
1.21
ENST00000324103
21
ENSE00001686595
chr14:
24629448-24629616
169
RNF31_HUMAN
999-1055
57
0
-
-
1.22b
ENST00000324103
22b
ENSE00001926486
chr14:
24629729-24629866
138
RNF31_HUMAN
1056-1072
17
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ct7a1 (A:8-80)
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Organisms
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Class
:
Small proteins
(3458)
Fold
:
RING/U-box
(48)
Superfamily
:
RING/U-box
(48)
Family
:
IBR domain
(1)
Protein domain
:
Ring finger protein 31
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2ct7a1
A:8-80
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (454 KB)
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