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Asym. Unit
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Asym.Unit (742 KB)
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Models
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Title
:
SOLUTION STRUCTURE OF THE FHA DOMAIN OF HUMAN UBIQUITIN LIGASE PROTEIN RNF8
Authors
:
F. Hayashi, T. Nagashima, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
23 May 05 (Deposition) - 23 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
11-Stranded Beta Sandwich, Ring Finger Protein 8, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
F. Hayashi, T. Nagashima, S. Yokoyama
Solution Structure Of The Fha Domain Of Human Ubiquitin Ligase Protein Rnf8
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
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1: FHA_DOMAIN (A:38-92)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FHA_DOMAIN
PS50006
Forkhead-associated (FHA) domain profile.
RNF8_HUMAN
38-92
1
A:38-92
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Exons
(3, 3)
Info
All Exons
Exon 1.1a (A:1-37)
Exon 1.3 (A:38-80)
Exon 1.5e (A:81-145 (gaps))
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1: Boundary -/1.1a
2: Boundary 1.1a/1.3
3: Boundary 1.3/1.5e
4: Boundary 1.5e/1.7
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000373479
1a
ENSE00001556351
chr6:
37321748-37322051
304
RNF8_HUMAN
1-37
37
1
A:1-37
37
1.3
ENST00000373479
3
ENSE00002143174
chr6:
37328222-37328350
129
RNF8_HUMAN
38-80
43
1
A:38-80
43
1.5e
ENST00000373479
5e
ENSE00002173345
chr6:
37336260-37336994
735
RNF8_HUMAN
81-325
245
1
A:81-145 (gaps)
104
1.7
ENST00000373479
7
ENSE00002172935
chr6:
37339288-37339350
63
RNF8_HUMAN
326-346
21
0
-
-
1.8
ENST00000373479
8
ENSE00002175649
chr6:
37342396-37342485
90
RNF8_HUMAN
347-376
30
0
-
-
1.9
ENST00000373479
9
ENSE00002175385
chr6:
37344702-37344809
108
RNF8_HUMAN
377-412
36
0
-
-
1.10
ENST00000373479
10
ENSE00002179660
chr6:
37348926-37349130
205
RNF8_HUMAN
413-481
69
0
-
-
1.11d
ENST00000373479
11d
ENSE00001884472
chr6:
37358518-37362514
3997
RNF8_HUMAN
481-485
5
0
-
-
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d2cswa1 (A:8-139)
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Class
:
All beta proteins
(24004)
Fold
:
SMAD/FHA domain
(62)
Superfamily
:
SMAD/FHA domain
(62)
Family
:
FHA domain
(36)
Protein domain
:
Ubiquitin ligase protein RNF8
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2cswa1
A:8-139
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