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2CSQ
Asym. Unit
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Asym.Unit (465 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SECOND SH3 DOMAIN OF HUMAN RIM-BINDING PROTEIN 2
Authors
:
K. Inoue, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
22 May 05 (Deposition) - 22 Nov 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Sh3 Domain, Rim Binding Protein 2, Rim-Bp2, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Endocytosis/Exocytosis Complex
(Keyword Search:
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Reference
:
K. Inoue, F. Hayashi, S. Yokoyama
Solution Structure Of The Second Sh3 Domain Of Human Rim-Binding Protein 2
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_057715 (D55N, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_057715
D
888
N
RIMB2_HUMAN
Polymorphism
11060869
A
D
55
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: SH3 (-|A:15-83|A:94-97)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH3
PS50002
Src homology 3 (SH3) domain profile.
RIMB2_HUMAN
167-234
848-916
952-1019
2
-
A:15-83
A:94-97
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Exons
(4, 4)
Info
All Exons
Exon 1.14 (A:1-5)
Exon 1.15 (A:6-51)
Exon 1.16 (A:52-91)
Exon 1.17 (A:92-96 (gaps))
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All Exon Boundaries
1: Boundary 1.13/1.14
2: Boundary 1.14/1.15
3: Boundary 1.15/1.16
4: Boundary 1.16/1.17
5: Boundary 1.17/1.18
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261655
1
ENSE00001225399
chr12:
131002410-131002373
38
RIMB2_HUMAN
-
0
0
-
-
1.2
ENST00000261655
2
ENSE00001121163
chr12:
130991315-130991193
123
RIMB2_HUMAN
-
0
0
-
-
1.3
ENST00000261655
3
ENSE00002176189
chr12:
130963561-130963457
105
RIMB2_HUMAN
1-34
34
0
-
-
1.4
ENST00000261655
4
ENSE00001656454
chr12:
130941245-130941041
205
RIMB2_HUMAN
35-103
69
0
-
-
1.5
ENST00000261655
5
ENSE00000757527
chr12:
130935885-130935740
146
RIMB2_HUMAN
103-151
49
0
-
-
1.6
ENST00000261655
6
ENSE00000938260
chr12:
130934821-130934745
77
RIMB2_HUMAN
152-177
26
0
-
-
1.7
ENST00000261655
7
ENSE00000938261
chr12:
130929814-130929705
110
RIMB2_HUMAN
177-214
38
0
-
-
1.8
ENST00000261655
8
ENSE00000757523
chr12:
130927205-130926393
813
RIMB2_HUMAN
214-485
272
0
-
-
1.9
ENST00000261655
9
ENSE00000757521
chr12:
130923061-130922910
152
RIMB2_HUMAN
485-535
51
0
-
-
1.10
ENST00000261655
10
ENSE00000757520
chr12:
130921836-130921387
450
RIMB2_HUMAN
536-685
150
0
-
-
1.11
ENST00000261655
11
ENSE00000757519
chr12:
130919425-130919279
147
RIMB2_HUMAN
686-734
49
0
-
-
1.13
ENST00000261655
13
ENSE00000757518
chr12:
130912882-130912724
159
RIMB2_HUMAN
735-787
53
0
-
-
1.14
ENST00000261655
14
ENSE00000757517
chr12:
130907106-130906998
109
RIMB2_HUMAN
788-824
37
1
A:1-5
5
1.15
ENST00000261655
15
ENSE00000757516
chr12:
130898851-130898670
182
RIMB2_HUMAN
824-884
61
1
A:6-51
46
1.16
ENST00000261655
16
ENSE00000903693
chr12:
130897332-130897164
169
RIMB2_HUMAN
885-941
57
1
A:52-91
40
1.17
ENST00000261655
17
ENSE00000903691
chr12:
130892374-130892271
104
RIMB2_HUMAN
941-975
35
1
A:92-96 (gaps)
24
1.18
ENST00000261655
18
ENSE00000757511
chr12:
130890788-130890717
72
RIMB2_HUMAN
976-999
24
0
-
-
1.19
ENST00000261655
19
ENSE00000903689
chr12:
130884358-130884224
135
RIMB2_HUMAN
1000-1044
45
0
-
-
1.20
ENST00000261655
20
ENSE00001425478
chr12:
130883706-130880682
3025
RIMB2_HUMAN
1045-1052
8
0
-
-
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2csqA01 (A:17-81)
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
SH3 Domains
(267)
Human (Homo sapiens)
(133)
1a
2csqA01
A:17-81
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Chain A
Asymmetric Unit 1
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