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2CME
Biol. Unit 1
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Asym.Unit (106 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (27 KB)
Biol.Unit 3 (27 KB)
Biol.Unit 4 (27 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF SARS CORONAVIRUS ORF-9B PROTEIN
Authors
:
C. Meier, A. R. Aricescu, R. Assenberg, R. T. Aplin, R. J. C. Gilbert, J. M. Grimes, D. I. Stuart
Date
:
06 May 06 (Deposition) - 19 Jul 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Alternative Open Reading Frame, Lipid-Binding, Virus Assembly, Hypothetical Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
C. Meier, A. R. Aricescu, R. Assenberg, R. T. Aplin, R. J. C. Gilbert, J. M. Grimes, D. I. Stuart
The Crystal Structure Of Orf-9B, A Lipid Binding Protein From The Sars Coronavirus.
Structure V. 14 1157 2006
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: DECANE (D10a)
1b: DECANE (D10b)
1c: DECANE (D10c)
1d: DECANE (D10d)
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No.
Name
Count
Type
Full Name
1
D10
1
Ligand/Ion
DECANE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU B:53 , VAL B:77
BINDING SITE FOR RESIDUE D10 B1099
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_ORF9B_CVHSA_001 (A58V, chain A/B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_ORF9B_CVHSA_001
*
A
58
V
ORF9B_CVHSA
---
---
A/B
A
58
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
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SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d2cmea1 (A:9-98)
1b: SCOP_d2cmeb1 (B:9-98)
1c: SCOP_d2cmec_ (C:)
1d: SCOP_d2cmed_ (D:)
1e: SCOP_d2cmee1 (E:9-98)
1f: SCOP_d2cmef_ (F:)
1g: SCOP_d2cmeg_ (G:)
1h: SCOP_d2cmeh_ (H:)
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Class
:
All beta proteins
(24004)
Fold
:
SARS ORF9b-like
(1)
Superfamily
:
'SARS ORF9b-like
(1)
Family
:
SARS ORF9b-like
(1)
Protein domain
:
Hypothetical protein 5 (ORF-9b)
(1)
SARS coronavirus [TaxId: 227859]
(1)
1a
d2cmea1
A:9-98
1b
d2cmeb1
B:9-98
1c
d2cmec_
C:
1d
d2cmed_
D:
1e
d2cmee1
E:9-98
1f
d2cmef_
F:
1g
d2cmeg_
G:
1h
d2cmeh_
H:
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CATH Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (106 KB)
Header - Asym.Unit
Biol.Unit 1 (27 KB)
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Biol.Unit 3 (27 KB)
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