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2CJA
Asym. Unit
Info
Asym.Unit (179 KB)
Biol.Unit 1 (170 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF METHANOSARCINA BARKERI SERYL-TRNA SYNTHETASE COMPLEXED WITH ATP
Authors
:
S. Bilokapic, T. Maier, D. Ahel, I. Gruic-Sovulj, D. Soll, I. Weygand-D N. Ban
Date
:
30 Mar 06 (Deposition) - 26 Jun 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ligase, Zinc Ion, Trna Synthetase,
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Bilokapic, T. Maier, D. Ahel, I. Gruic-Sovulj, D. Soll, I. Weygand-Durasevic, N. Ban
Structure Of The Unusual Seryl-Trna Synthetase Reveals A Distinct Zinc-Dependent Mode Of Substrate Recognition
Embo J. V. 25 2498 2006
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Hetero Components
(5, 34)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
4u: SELENOMETHIONINE (MSEu)
4v: SELENOMETHIONINE (MSEv)
4w: SELENOMETHIONINE (MSEw)
4x: SELENOMETHIONINE (MSEx)
4y: SELENOMETHIONINE (MSEy)
4z: SELENOMETHIONINE (MSEz)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
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Label:
No.
Name
Count
Type
Full Name
1
ATP
2
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
CL
2
Ligand/Ion
CHLORIDE ION
3
MG
2
Ligand/Ion
MAGNESIUM ION
4
MSE
26
Mod. Amino Acid
SELENOMETHIONINE
5
ZN
2
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:304 , CYS A:306 , GLU A:355 , CYS A:461 , ATP A:1505
BINDING SITE FOR RESIDUE ZN A1503
2
AC2
SOFTWARE
TRP A:245 , TYR A:303 , ALA A:304 , GLN A:305
BINDING SITE FOR RESIDUE CL A1504
3
AC3
SOFTWARE
ALA B:304 , CYS B:306 , GLU B:355 , CYS B:461
BINDING SITE FOR RESIDUE ZN B1503
4
AC4
SOFTWARE
TRP B:245 , TYR B:303 , ALA B:304 , GLN B:305
BINDING SITE FOR RESIDUE CL B1504
5
AC5
SOFTWARE
ARG B:336 , GLU B:338 , ATP B:1507
BINDING SITE FOR RESIDUE MG B1505
6
AC6
SOFTWARE
ASP B:416 , GLU B:432 , ASN B:435 , ATP B:1507
BINDING SITE FOR RESIDUE MG B1506
7
AC7
SOFTWARE
HIS A:250 , TYR A:303 , ALA A:304 , ARG A:336 , GLU A:338 , VAL A:348 , PHE A:351 , ARG A:353 , GLU A:432 , ASN A:435 , GLY A:465 , ARG A:468 , ZN A:1503 , HOH A:2221
BINDING SITE FOR RESIDUE ATP A1505
8
AC8
SOFTWARE
ARG B:336 , GLU B:338 , ARG B:347 , VAL B:348 , PHE B:351 , ARG B:353 , GLU B:432 , PHE B:433 , ASN B:435 , GLY B:465 , ARG B:468 , MG B:1505 , MG B:1506 , HOH B:2168 , HOH B:2199 , HOH B:2228 , HOH B:2229 , HOH B:2230
BINDING SITE FOR RESIDUE ATP B1507
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (179 KB)
Header - Asym.Unit
Biol.Unit 1 (170 KB)
Header - Biol.Unit 1
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