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2CH2
Biol. Unit 1
Info
Asym.Unit (254 KB)
Biol.Unit 1 (126 KB)
Biol.Unit 2 (126 KB)
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(1)
Title
:
STRUCTURE OF THE ANOPHELES GAMBIAE 3-HYDROXYKYNURENINE TRANSAMINASE IN COMPLEX WITH INHIBITOR
Authors
:
F. Rossi, S. Garavaglia, G. B. Giovenzana, B. Arca, J. Li, M. Rizzi
Date
:
10 Mar 06 (Deposition) - 28 Mar 06 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Plp-Enzyme, Kynurenine Pathway, Transferase
(Keyword Search:
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Reference
:
F. Rossi, S. Garavaglia, G. B. Giovenzana, B. Arca, J. Li, M. Rizzi
Crystal Structure Of The Anopheles Gambiae 3- Hydroxykynurenine Transaminase
Proc. Natl. Acad. Sci. Usa V. 103 5711 2006
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: 4-(2-AMINOPHENYL)-4-OXOBUTANOIC AC... (KY1a)
1b: 4-(2-AMINOPHENYL)-4-OXOBUTANOIC AC... (KY1b)
1c: 4-(2-AMINOPHENYL)-4-OXOBUTANOIC AC... (KY1c)
1d: 4-(2-AMINOPHENYL)-4-OXOBUTANOIC AC... (KY1d)
2a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
2b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
2c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
2d: PYRIDOXAL-5'-PHOSPHATE (PLPd)
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No.
Name
Count
Type
Full Name
1
KY1
2
Ligand/Ion
4-(2-AMINOPHENYL)-4-OXOBUTANOIC ACID
2
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
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Sites
(4, 4)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
GLY A:25 , SER A:154 , LYS A:205 , GLN A:344 , LEU A:347 , ARG A:356 , PLP A:1390 , HOH A:2006 , SER D:43 , ASN D:44 , PHE D:45 , TYR D:256 , HOH D:2019
BINDING SITE FOR RESIDUE KY1 D1390
2
AC4
SOFTWARE
TYR A:256 , THR A:259 , SER D:77 , ALA D:78 , HIS D:79 , TRP D:104 , GLY D:152 , SER D:154 , ASP D:179 , VAL D:181 , ALA D:182 , GLN D:204 , LYS D:205 , KY1 D:1392
BINDING SITE FOR RESIDUE PLP D1391
3
AC5
SOFTWARE
SER A:77 , ALA A:78 , HIS A:79 , TRP A:104 , GLY A:152 , SER A:154 , ASP A:179 , VAL A:181 , ALA A:182 , GLN A:204 , LYS A:205 , TYR D:256 , THR D:259 , KY1 D:1390
BINDING SITE FOR RESIDUE PLP A1390
4
AC8
SOFTWARE
SER A:43 , ASN A:44 , TYR A:256 , PRO D:24 , GLY D:25 , TRP D:104 , SER D:154 , GLN D:344 , ARG D:356 , PLP D:1391
BINDING SITE FOR RESIDUE KY1 D1392
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2ch2a_ (A:)
1b: SCOP_d2ch2b_ (B:)
1c: SCOP_d2ch2c_ (C:)
1d: SCOP_d2ch2d_ (D:)
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Protein Domains
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(
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PLP-dependent transferase-like
(627)
Superfamily
:
PLP-dependent transferases
(625)
Family
:
automated matches
(163)
Protein domain
:
automated matches
(163)
African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
(2)
1a
d2ch2a_
A:
1b
d2ch2b_
B:
1c
d2ch2c_
C:
1d
d2ch2d_
D:
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_2ch2A02 (A:30-278)
1b: CATH_2ch2B02 (B:30-278)
1c: CATH_2ch2C02 (C:30-278)
1d: CATH_2ch2D02 (D:30-278)
2a: CATH_2ch2A01 (A:3-29,A:279-389)
2b: CATH_2ch2B01 (B:3-29,B:279-389)
2c: CATH_2ch2C01 (C:3-29,C:279-389)
2d: CATH_2ch2D01 (D:3-29,D:279-389)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Aspartate Aminotransferase; domain 2
(384)
Homologous Superfamily
:
Type I PLP-dependent aspartate aminotransferase-like (Major domain)
(384)
African malaria mosquito (Anopheles gambiae)
(1)
1a
2ch2A02
A:30-278
1b
2ch2B02
B:30-278
1c
2ch2C02
C:30-278
1d
2ch2D02
D:30-278
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Aspartate Aminotransferase, domain 1
(355)
Homologous Superfamily
:
Aspartate Aminotransferase, domain 1
(354)
African malaria mosquito (Anopheles gambiae)
(1)
2a
2ch2A01
A:3-29,A:279-389
2b
2ch2B01
B:3-29,B:279-389
2c
2ch2C01
C:3-29,C:279-389
2d
2ch2D01
D:3-29,D:279-389
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (254 KB)
Header - Asym.Unit
Biol.Unit 1 (126 KB)
Header - Biol.Unit 1
Biol.Unit 2 (126 KB)
Header - Biol.Unit 2
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