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2C91
Biol. Unit 3
Info
Asym.Unit (585 KB)
Biol.Unit 1 (67 KB)
Biol.Unit 10 (67 KB)
Biol.Unit 2 (66 KB)
Biol.Unit 3 (68 KB)
Biol.Unit 4 (68 KB)
Biol.Unit 5 (68 KB)
Biol.Unit 6 (67 KB)
Biol.Unit 7 (68 KB)
Biol.Unit 8 (66 KB)
Biol.Unit 9 (66 KB)
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(1)
Title
:
MOUSE SUCCINIC SEMIALDEHYDE REDUCTASE, AKR7A5
Authors
:
X. Zhu, E. M. Ellis, A. J. Lapthorn
Date
:
08 Dec 05 (Deposition) - 15 Feb 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Keywords
:
Aldo/Keto Reductase, Akr, Succinic Semialdehyde Reductase, Tartrate, Golgi Stack, Nad, Nadp, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Zhu, A. J. Lapthorn, E. M. Ellis
Crystal Structure Of Mouse Succinic Semialdehyde Reductase Akr7A5: Structural Basis For Substrate Specificity.
Biochemistry V. 45 1562 2006
(for further references see the
PDB file header
)
[
close entry info
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
1l: GLYCEROL (GOLl)
1m: GLYCEROL (GOLm)
1n: GLYCEROL (GOLn)
1o: GLYCEROL (GOLo)
1p: GLYCEROL (GOLp)
1q: GLYCEROL (GOLq)
1r: GLYCEROL (GOLr)
1s: GLYCEROL (GOLs)
1t: GLYCEROL (GOLt)
1u: GLYCEROL (GOLu)
1v: GLYCEROL (GOLv)
1w: GLYCEROL (GOLw)
1x: GLYCEROL (GOLx)
1y: GLYCEROL (GOLy)
2a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
2b: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESb)
2c: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESc)
2d: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESd)
2e: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESe)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
3d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
3e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
3f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
3g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
3h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
3i: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPi)
3j: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPj)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
5a: L(+)-TARTARIC ACID (TLAa)
5b: L(+)-TARTARIC ACID (TLAb)
5c: L(+)-TARTARIC ACID (TLAc)
5d: L(+)-TARTARIC ACID (TLAd)
5e: L(+)-TARTARIC ACID (TLAe)
5f: L(+)-TARTARIC ACID (TLAf)
5g: L(+)-TARTARIC ACID (TLAg)
5h: L(+)-TARTARIC ACID (TLAh)
5i: L(+)-TARTARIC ACID (TLAi)
5j: L(+)-TARTARIC ACID (TLAj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
MES
1
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
3
NAP
1
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
4
PO4
-1
Ligand/Ion
PHOSPHATE ION
5
TLA
1
Ligand/Ion
L(+)-TARTARIC ACID
[
close Hetero Component info
]
Sites
(7, 7)
Info
All Sites
1: AC8 (SOFTWARE)
2: AC9 (SOFTWARE)
3: BC1 (SOFTWARE)
4: DC6 (SOFTWARE)
5: DC7 (SOFTWARE)
6: DC8 (SOFTWARE)
7: EC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC8
SOFTWARE
GLY C:11 , THR C:12 , MET C:13 , ARG C:18 , ASP C:40 , TYR C:45 , HIS C:109 , SER C:139 , ASN C:140 , GLN C:165 , TYR C:193 , ASN C:194 , PRO C:195 , LEU C:196 , ALA C:197 , GLY C:198 , GLY C:199 , LYS C:204 , TYR C:205 , GLY C:217 , ARG C:218 , TYR C:228 , ILE C:282 , GLY C:284 , MET C:285 , SER C:286 , GLN C:290 , GLN C:293 , ASN C:294 , ARG C:327 , TLA C:360 , HOH C:2134 , HOH C:2214 , HOH C:2215 , HOH C:2216 , HOH C:2217 , HOH C:2218
BINDING SITE FOR RESIDUE NAP C 350
2
AC9
SOFTWARE
MET C:13 , MET C:44 , TYR C:45 , HIS C:109 , TRP C:224 , TYR C:228 , ARG C:231 , ARG C:327 , NAP C:350
BINDING SITE FOR RESIDUE TLA C 360
3
BC1
SOFTWARE
TRP C:77 , GLU C:78 , GLY C:79 , TRP H:77 , GLU H:78 , GLY H:79 , PRO H:111 , ASP H:112 , HIS H:113
BINDING SITE FOR RESIDUE MES C 364
4
DC6
SOFTWARE
THR C:227 , ARG C:231 , ASN C:324 , PHE C:326 , ARG C:327 , HOH C:2220
BINDING SITE FOR RESIDUE GOL C 361
5
DC7
SOFTWARE
HIS C:113 , GLU C:145 , GLU C:148 , HOH C:2083 , HOH C:2221 , HOH C:2222 , HOH C:2223 , HIS D:185
BINDING SITE FOR RESIDUE GOL C 362
6
DC8
SOFTWARE
GLN C:214 , PHE C:220 , GLY C:221 , ARG C:229 , HOH C:2224 , LYS H:96 , HOH H:2045
BINDING SITE FOR RESIDUE GOL C 363
7
EC1
SOFTWARE
HIS C:185 , HIS D:113 , TRP D:144 , GLU D:145 , GLU D:148 , HOH D:2100 , HOH D:2114 , HOH D:2265 , HOH D:2266 , HOH D:2267
BINDING SITE FOR RESIDUE GOL D 362
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
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[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d2c91a_ (A:)
1b: SCOP_d2c91b_ (B:)
1c: SCOP_d2c91c_ (C:)
1d: SCOP_d2c91d_ (D:)
1e: SCOP_d2c91e_ (E:)
1f: SCOP_d2c91f_ (F:)
1g: SCOP_d2c91g_ (G:)
1h: SCOP_d2c91h_ (H:)
1i: SCOP_d2c91i_ (I:)
1j: SCOP_d2c91j_ (J:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
automated matches
(62)
Mouse (Mus musculus) [TaxId: 10090]
(11)
1a
d2c91a_
A:
1b
d2c91b_
B:
1c
d2c91c_
C:
1d
d2c91d_
D:
1e
d2c91e_
E:
1f
d2c91f_
F:
1g
d2c91g_
G:
1h
d2c91h_
H:
1i
d2c91i_
I:
1j
d2c91j_
J:
[
close SCOP info
]
CATH Domains
(1, 10)
Info
all CATH domains
1a: CATH_2c91B00 (B:4-327)
1b: CATH_2c91H00 (H:4-327)
1c: CATH_2c91I00 (I:4-327)
1d: CATH_2c91A00 (A:3-327)
1e: CATH_2c91J00 (J:3-327)
1f: CATH_2c91C00 (C:4-327)
1g: CATH_2c91D00 (D:4-327)
1h: CATH_2c91E00 (E:4-327)
1i: CATH_2c91F00 (F:4-327)
1j: CATH_2c91G00 (G:4-327)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
NADP-dependent oxidoreductase
(181)
Mouse (Mus musculus)
(3)
1a
2c91B00
B:4-327
1b
2c91H00
H:4-327
1c
2c91I00
I:4-327
1d
2c91A00
A:3-327
1e
2c91J00
J:3-327
1f
2c91C00
C:4-327
1g
2c91D00
D:4-327
1h
2c91E00
E:4-327
1i
2c91F00
F:4-327
1j
2c91G00
G:4-327
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain C
Asymmetric Unit 1
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