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2C6U
Asym. Unit
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Asym.Unit (32 KB)
Biol.Unit 1 (28 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN CLEC-2 (CLEC1B)
Authors
:
A. A. Watson, J. Brown, C. A. O'Callaghan
Date
:
11 Nov 05 (Deposition) - 20 Nov 06 (Release) - 12 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lectin, Clec-2, Rhodocytin, Aggretin, C-Type Lectin-Like, Platelets, Thrombosis, Clec1B
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. A. Watson, J. Brown, K. Harlos, J. A. Eble, T. S. Walter, C. A. O'Callaghan
The Crystal Structure And Mutational Binding Analysis Of Th Extracellular Domain Of The Platelet-Activating Receptor Clec-2.
J. Biol. Chem. V. 282 3165 2007
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: C_TYPE_LECTIN_2 (A:109-217)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
C_TYPE_LECTIN_2
PS50041
C-type lectin domain profile.
CLC1B_HUMAN
109-217
1
A:109-217
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Exons
(3, 3)
Info
All Exons
Exon 1.4a (A:100-146)
Exon 1.9b (A:147-182)
Exon 1.14a (A:182-221)
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1: Boundary 1.3/1.4a
2: Boundary 1.4a/1.9b
3: Boundary 1.9b/1.14a
4: Boundary 1.14a/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000298527
1
ENSE00002178372
chr12:
10151899-10151636
264
CLC1B_HUMAN
1-22
22
0
-
-
1.2
ENST00000298527
2
ENSE00001626056
chr12:
10150979-10150881
99
CLC1B_HUMAN
22-55
34
0
-
-
1.3
ENST00000298527
3
ENSE00001677545
chr12:
10149878-10149759
120
CLC1B_HUMAN
55-95
41
0
-
-
1.4a
ENST00000298527
4a
ENSE00001095413
chr12:
10149599-10149445
155
CLC1B_HUMAN
95-146
52
1
A:100-146
47
1.9b
ENST00000298527
9b
ENSE00001095422
chr12:
10147845-10147739
107
CLC1B_HUMAN
147-182
36
1
A:147-182
36
1.14a
ENST00000298527
14a
ENSE00001375569
chr12:
10145886-10145664
223
CLC1B_HUMAN
182-229
48
1
A:182-221
40
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SCOP Domains
(1, 1)
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1a: SCOP_d2c6ua_ (A:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
C-type lectin-like
(322)
Superfamily
:
C-type lectin-like
(322)
Family
:
automated matches
(88)
Protein domain
:
automated matches
(88)
Human (Homo sapiens) [TaxId: 9606]
(60)
1a
d2c6ua_
A:
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CATH Domains
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Asymmetric Unit 1
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