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2C2H
Biol. Unit 1
Info
Asym.Unit (74 KB)
Biol.Unit 1 (35 KB)
Biol.Unit 2 (33 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HUMAN RAC3 IN COMPLEX WITH GDP
Authors
:
J. E. Debreczeni, X. Yang, Y. Zao, J. Elkins, C. Gileadi, N. Burgess, S. C O. Gileadi, O. Fedorov, G. Bunkoczi, F. Von Delft, D. Doyle, M. Sundst C. Arrowsmith, J. Weigelt, A. Edwards
Date
:
29 Sep 05 (Deposition) - 13 Oct 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Gtpase Rac3, Small Gtp Binding Protein, P21 Rac, Ras- Related C3 Butulinum Toxin Substrate 3, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. E. Debreczeni, X. Yang, Y. Zao, J. Elkins, C. Gileadi, N. Burgess, S. Colebrook, O. Gileadi, O. Fedorov, G. Bunkoczi, F. Von Delft, D. Doyle, M. Sundstrom, C. Arrowsmith, J. Weigelt, A. Edwards
Crystal Structure Of The Human Rac3 In Complex With Gdp
To Be Published
[
close entry info
]
Hetero Components
(2, 7)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
2a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
2c: GUANOSINE-5'-DIPHOSPHATE (GDPc)
2d: GUANOSINE-5'-DIPHOSPHATE (GDPd)
2e: GUANOSINE-5'-DIPHOSPHATE (GDPe)
2f: GUANOSINE-5'-DIPHOSPHATE (GDPf)
2g: GUANOSINE-5'-DIPHOSPHATE (GDPg)
2h: GUANOSINE-5'-DIPHOSPHATE (GDPh)
2i: GUANOSINE-5'-DIPHOSPHATE (GDPi)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
GDP
5
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
SO4
2
Ligand/Ion
SULFATE ION
[
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]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: CC4 (SOFTWARE)
13: CC5 (SOFTWARE)
14: CC6 (SOFTWARE)
15: CC7 (SOFTWARE)
16: CC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:104 , GDP A:1179 , GDP A:1180 , HOH A:2050
BINDING SITE FOR RESIDUE CA A1183
02
AC2
SOFTWARE
HIS A:103 , GDP A:1179 , GDP A:1180
BINDING SITE FOR RESIDUE CA A1184
03
AC3
SOFTWARE
GDP A:1180 , GDP A:1181 , SO4 A:1189 , HOH A:2099
BINDING SITE FOR RESIDUE CA A1185
04
AC4
SOFTWARE
HIS A:107 , GDP A:1181 , SO4 A:1188 , SO4 A:1189
BINDING SITE FOR RESIDUE CA A1186
05
AC5
SOFTWARE
GDP A:1181
BINDING SITE FOR RESIDUE CA A1187
06
AC6
SOFTWARE
PRO A:106 , HIS A:107 , GDP A:1180 , GDP A:1181 , CA A:1186 , SO4 A:1189 , CA A:1193 , HOH A:2048 , HOH A:2099 , HOH A:2102 , HOH A:2103
BINDING SITE FOR RESIDUE SO4 A1188
07
AC7
SOFTWARE
HIS A:107 , GDP A:1181 , CA A:1185 , CA A:1186 , SO4 A:1188 , CA A:1193 , HOH A:2099 , HOH A:2104 , HOH A:2105
BINDING SITE FOR RESIDUE SO4 A1189
08
AC8
SOFTWARE
THR A:17 , GDP A:1178 , HOH A:2008 , HOH A:2019 , HOH A:2081 , HOH A:2082
BINDING SITE FOR RESIDUE MG A1190
09
AC9
SOFTWARE
GDP A:1179 , GDP A:1180 , HOH A:2086 , HOH A:2089
BINDING SITE FOR RESIDUE MG A1191
10
BC1
SOFTWARE
GDP A:1180 , HOH A:2001 , HOH A:2085 , HOH A:2087 , HOH A:2094 , HOH A:2102
BINDING SITE FOR RESIDUE MG A1192
11
BC2
SOFTWARE
SO4 A:1188 , SO4 A:1189 , HOH A:2103
BINDING SITE FOR RESIDUE CA A1193
12
CC4
SOFTWARE
ALA A:13 , VAL A:14 , GLY A:15 , LYS A:16 , THR A:17 , CYS A:18 , PHE A:28 , LYS A:116 , ASP A:118 , LEU A:119 , ARG A:147 , SER A:158 , ALA A:159 , LEU A:160 , MG A:1190 , HOH A:2007 , HOH A:2080 , HOH A:2081 , HOH A:2082 , HOH A:2083 , HOH A:2084
BINDING SITE FOR RESIDUE GDP A1178
13
CC5
SOFTWARE
PRO A:99 , GLU A:100 , HIS A:103 , HIS A:104 , GDP A:1180 , GDP A:1181 , CA A:1183 , CA A:1184 , MG A:1191 , HOH A:2085 , HOH A:2086 , HOH A:2087 , HOH A:2089
BINDING SITE FOR RESIDUE GDP A1179
14
CC6
SOFTWARE
HIS A:103 , HIS A:104 , PRO A:106 , GDP A:1179 , GDP A:1181 , CA A:1183 , CA A:1184 , CA A:1185 , SO4 A:1188 , MG A:1191 , MG A:1192 , HOH A:2085 , HOH A:2086 , HOH A:2087 , HOH A:2088 , HOH A:2089 , HOH A:2090 , HOH A:2091 , HOH A:2092
BINDING SITE FOR RESIDUE GDP A1180
15
CC7
SOFTWARE
HIS A:107 , GDP A:1179 , GDP A:1180 , CA A:1185 , CA A:1186 , CA A:1187 , SO4 A:1188 , SO4 A:1189 , HOH A:2052 , HOH A:2085 , HOH A:2095 , HOH A:2096 , HOH A:2098 , HOH A:2099 , HOH A:2105
BINDING SITE FOR RESIDUE GDP A1181
16
CC8
SOFTWARE
ALA A:27 , PHE A:28 , GLY A:30 , LEU A:117 , ARG A:120 , TYR A:139 , GLU A:156 , ARG A:163 , HOH A:2071 , HOH A:2100 , HOH A:2101 , ASP B:170
BINDING SITE FOR RESIDUE GDP A1182
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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;
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[
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2c2hb_ (B:)
2a: SCOP_d2c2ha1 (A:3-177)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
automated matches
(173)
Human (Homo sapiens) [TaxId: 9606]
(112)
1a
d2c2hb_
B:
Protein domain
:
Rac3
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
2a
d2c2ha1
A:3-177
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2c2hB00 (B:1-177)
1b: CATH_2c2hA00 (A:3-177)
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)
Organisms
(
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2c2hB00
B:1-177
1b
2c2hA00
A:3-177
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (74 KB)
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