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2C0M
Biol. Unit 4
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Asym.Unit (188 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (50 KB)
Biol.Unit 3 (49 KB)
Biol.Unit 4 (48 KB)
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(1)
Title
:
APO FORM OF THE TPR DOMAIN OF THE PEX5P RECEPTOR
Authors
:
W. A. Stanley, P. Kursula, M. Wilmanns
Date
:
05 Sep 05 (Deposition) - 15 Nov 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: F (1x)
Keywords
:
Transport Protein, Tpr Repeat, Transport, Import Receptor Complex, Peroxisome, Disease Mutation, Protein Transport, Zellweger Syndrome
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. A. Stanley, F. V. Filipp, P. Kursula, N. Schuller, R. Erdmann, W. Schliebs, M. Sattler, M. Wilmanns
Recognition Of A Functional Peroxisome Type 1 Target By The Dynamic Import Receptor Pex5P.
Mol. Cell V. 24 653 2006
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_007543 (N489K, chain F, )
2: VAR_031328 (S563W, chain F, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_007543
N
526
K
PEX5_HUMAN
Disease (PBD2B)
---
F
N
489
K
2
UniProt
VAR_031328
S
600
W
PEX5_HUMAN
Disease (PBD2B)
---
F
S
563
W
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: TPR (F:519-552)
2: TPR_REGION (F:298-552)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TPR
PS50005
TPR repeat profile.
PEX5_HUMAN
335-368
369-402
488-521
522-555
556-589
5
-
-
-
F:298-331
-
-
-
F:332-365
-
-
-
F:451-484
-
-
-
F:485-518
-
-
-
F:519-552
2
TPR_REGION
PS50293
TPR repeat region circular profile.
PEX5_HUMAN
335-589
1
-
-
-
F:298-552
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2c0ma_ (A:)
1b: SCOP_d2c0mb_ (B:)
1c: SCOP_d2c0mc_ (C:)
1d: SCOP_d2c0mf_ (F:)
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
TPR-like
(83)
Family
:
Tetratricopeptide repeat (TPR)
(47)
Protein domain
:
automated matches
(11)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d2c0ma_
A:
1b
d2c0mb_
B:
1c
d2c0mc_
C:
1d
d2c0mf_
F:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2c0mA00 (A:284-602)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.10, no name defined]
(42)
Human (Homo sapiens)
(17)
1a
2c0mA00
A:284-602
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Pfam Domains
(0, 0)
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Chain F
Asymmetric Unit 1
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Asym.Unit (188 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (50 KB)
Header - Biol.Unit 2
Biol.Unit 3 (49 KB)
Header - Biol.Unit 3
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