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2C0J
Asym. Unit
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Asym.Unit (55 KB)
Biol.Unit 1 (51 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE BET3-TRS33 HETERODIMER
Authors
:
M. -S. Kim, M. -J. Yi, K. -H. Lee, J. Wagner, C. Munger, Y. -G. Kim, M. White M. Cygler, B. -H. Oh, M. Sacher
Date
:
03 Sep 05 (Deposition) - 07 Feb 06 (Release) - 14 Jan 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transport, Transport Protein, Endoplasmic Reticulum, Er-Golgi Transport, Lipoprotein, Palmitate
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. -S. Kim, M. -J. Yi, K. -H. Lee, J. Wagner, C. Munger, Y. -G. Kim, M. Whiteway, M. Cygler, B. -H. Oh, M. Sacher
Biochemical And Crystallographic Studies Reveal A Specific Interaction Between Trapp Subunits Trs33P And Bet3P
Traffic V. 6 1183 2005
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PALMITIC ACID (PLMa)
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No.
Name
Count
Type
Full Name
1
PLM
1
Ligand/Ion
PALMITIC ACID
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:68 , VAL A:77 , ALA A:82 , MET A:144
BINDING SITE FOR RESIDUE PLM A1068
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.2b (A:15-47)
Exon 1.3a (A:47-80)
Exon 1.5b (A:81-141)
Exon 1.5g (A:142-175)
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1: Boundary 1.1c/1.2b
2: Boundary 1.2b/1.3a
3: Boundary 1.3a/1.5b
4: Boundary 1.5b/1.5g
5: Boundary 1.5g/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000373166
1c
ENSE00001889875
chr1:
36615070-36614938
133
TPPC3_HUMAN
1-14
14
0
-
-
1.2b
ENST00000373166
2b
ENSE00001718673
chr1:
36605767-36605670
98
TPPC3_HUMAN
15-47
33
1
A:15-47
33
1.3a
ENST00000373166
3a
ENSE00000766274
chr1:
36605420-36605321
100
TPPC3_HUMAN
47-80
34
1
A:47-80
34
1.5b
ENST00000373166
5b
ENSE00000766275
chr1:
36603579-36603397
183
TPPC3_HUMAN
81-141
61
1
A:81-141
61
1.5g
ENST00000373166
5g
ENSE00001459692
chr1:
36602923-36602173
751
TPPC3_HUMAN
142-180
39
1
A:142-175
34
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SCOP Domains
(1, 1)
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1a: SCOP_d2c0ja_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ligand-binding domain in the NO signalling and Golgi transport
(29)
Superfamily
:
Ligand-binding domain in the NO signalling and Golgi transport
(29)
Family
:
TRAPP components
(11)
Protein domain
:
automated matches
(7)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d2c0ja_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2c0jA00 (A:15-175)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Muramoyl-pentapeptide Carboxypeptidase; domain 2
(24)
Homologous Superfamily
:
Trafficking protein particle complex subunit 3
(11)
Homo sapiens. Organism_taxid: 9606.
(1)
1a
2c0jA00
A:15-175
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Pfam Domains
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Asymmetric Unit 1
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