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2BZ3
Biol. Unit 2
Info
Asym.Unit (268 KB)
Biol.Unit 1 (135 KB)
Biol.Unit 2 (134 KB)
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(1)
Title
:
STRUCTURE OF E. COLI KAS I H298E MUTANT IN COMPLEX WITH C12 FATTY ACID
Authors
:
J. G. Olsen, P. Von Wettstein-Knowles, A. Henriksen
Date
:
10 Aug 05 (Deposition) - 01 Feb 06 (Release) - 19 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Transferase, Acyltransferase, Claisen Condensation, Fatty Acid Biosynthesis, Fatty Acid Synthase, Thiolase Fold, Lipid Synthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Von Wettstein-Knowles, J. G. Olsen, K. A. Mcguire, A. Henriksen
Fatty Acid Synthesis. Role Of Active Site Histidines And Lysine In Cys-His-His-Type Beta- Ketoacyl-Acyl Carrier Protein Synthases.
Febs J. V. 273 695 2006
(for further references see the
PDB file header
)
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: LAURIC ACID (DAOa)
1b: LAURIC ACID (DAOb)
1c: LAURIC ACID (DAOc)
1d: LAURIC ACID (DAOd)
2a: AMMONIUM ION (NH4a)
2b: AMMONIUM ION (NH4b)
2c: AMMONIUM ION (NH4c)
2d: AMMONIUM ION (NH4d)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
DAO
2
Ligand/Ion
LAURIC ACID
2
NH4
3
Ligand/Ion
AMMONIUM ION
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC6 (SOFTWARE)
4: AC9 (SOFTWARE)
5: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
ASN C:296 , SER C:297 , GLU C:342 , SER C:387 , ASN C:388
BINDING SITE FOR RESIDUE NH4 C1406
2
AC4
SOFTWARE
ASN D:296 , SER D:297 , GLU D:342 , SER D:387 , ASN D:388
BINDING SITE FOR RESIDUE NH4 D1406
3
AC6
SOFTWARE
ARG A:124 , GLN D:37 , LYS D:40
BINDING SITE FOR RESIDUE SO4 D1409
4
AC9
SOFTWARE
GLY C:106 , GLY C:107 , ALA C:162 , CYS C:163 , MET C:197 , GLU C:200 , PHE C:201 , GLY C:391 , PHE C:392 , ALA D:137
BINDING SITE FOR RESIDUE DAO C1407
5
BC1
SOFTWARE
ALA C:137 , MET C:138 , GLY D:106 , ALA D:162 , CYS D:163 , MET D:197 , GLU D:200 , PHE D:201 , GLY D:391 , PHE D:392
BINDING SITE FOR RESIDUE DAO D1408
[
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_FABB_ECOLI_001 (A4T, chain C/D, )
2: VAR_FABB_ECOLI_002 (S140F, chain C/D, )
3: VAR_FABB_ECOLI_003 (G299S, chain C/D, )
4: VAR_FABB_ECOLI_004 (A329V, chain C/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FABB_ECOLI_001
*
A
4
T
FABB_ECOLI
---
---
C/D
A
4
T
2
UniProt
VAR_FABB_ECOLI_002
*
S
140
F
FABB_ECOLI
---
---
C/D
S
140
F
3
UniProt
VAR_FABB_ECOLI_003
*
G
299
S
FABB_ECOLI
---
---
C/D
G
299
S
4
UniProt
VAR_FABB_ECOLI_004
*
A
329
V
FABB_ECOLI
---
---
C/D
A
329
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: B_KETOACYL_SYNTHASE (C:154-170,D:154-170)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FABB_ECOL6
154-170
2
-
-
C:154-170
D:154-170
FABB_ECOLI
154-170
2
-
-
C:154-170
D:154-170
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d2bz3a2 (A:254-406)
1b: SCOP_d2bz3b2 (B:254-406)
1c: SCOP_d2bz3c2 (C:254-406)
1d: SCOP_d2bz3d2 (D:254-406)
2a: SCOP_d2bz3a1 (A:1-253)
2b: SCOP_d2bz3b1 (B:1-253)
2c: SCOP_d2bz3c1 (C:1-253)
2d: SCOP_d2bz3d1 (D:1-253)
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)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Escherichia coli [TaxId: 562]
(8)
1a
d2bz3a2
A:254-406
1b
d2bz3b2
B:254-406
1c
d2bz3c2
C:254-406
1d
d2bz3d2
D:254-406
Family
:
Thiolase-related
(67)
Protein domain
:
automated matches
(12)
Escherichia coli [TaxId: 562]
(6)
2a
d2bz3a1
A:1-253
2b
d2bz3b1
B:1-253
2c
d2bz3c1
C:1-253
2d
d2bz3d1
D:1-253
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_2bz3A02 (A:260-406)
1b: CATH_2bz3A01 (A:6-259)
1c: CATH_2bz3B01 (B:6-259)
1d: CATH_2bz3C01 (C:6-259)
1e: CATH_2bz3D01 (D:6-259)
1f: CATH_2bz3B02 (B:260-406)
1g: CATH_2bz3C02 (C:260-406)
1h: CATH_2bz3D02 (D:260-406)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Escherichia coli. Organism_taxid: 562.
(23)
1a
2bz3A02
A:260-406
1b
2bz3A01
A:6-259
1c
2bz3B01
B:6-259
1d
2bz3C01
C:6-259
1e
2bz3D01
D:6-259
1f
2bz3B02
B:260-406
1g
2bz3C02
C:260-406
1h
2bz3D02
D:260-406
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain C
Chain D
Asymmetric Unit 1
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Asym.Unit (268 KB)
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