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2BZ3
Asym. Unit
Info
Asym.Unit (268 KB)
Biol.Unit 1 (135 KB)
Biol.Unit 2 (134 KB)
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(1)
Title
:
STRUCTURE OF E. COLI KAS I H298E MUTANT IN COMPLEX WITH C12 FATTY ACID
Authors
:
J. G. Olsen, P. Von Wettstein-Knowles, A. Henriksen
Date
:
10 Aug 05 (Deposition) - 01 Feb 06 (Release) - 19 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Transferase, Acyltransferase, Claisen Condensation, Fatty Acid Biosynthesis, Fatty Acid Synthase, Thiolase Fold, Lipid Synthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Von Wettstein-Knowles, J. G. Olsen, K. A. Mcguire, A. Henriksen
Fatty Acid Synthesis. Role Of Active Site Histidines And Lysine In Cys-His-His-Type Beta- Ketoacyl-Acyl Carrier Protein Synthases.
Febs J. V. 273 695 2006
(for further references see the
PDB file header
)
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: LAURIC ACID (DAOa)
1b: LAURIC ACID (DAOb)
1c: LAURIC ACID (DAOc)
1d: LAURIC ACID (DAOd)
2a: AMMONIUM ION (NH4a)
2b: AMMONIUM ION (NH4b)
2c: AMMONIUM ION (NH4c)
2d: AMMONIUM ION (NH4d)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DAO
4
Ligand/Ion
LAURIC ACID
2
NH4
4
Ligand/Ion
AMMONIUM ION
3
SO4
2
Ligand/Ion
SULFATE ION
[
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]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:296 , SER A:297 , GLU A:342 , SER A:387 , ASN A:388
BINDING SITE FOR RESIDUE NH4 A1406
02
AC2
SOFTWARE
GLN A:37 , LYS A:40 , HOH A:2274
BINDING SITE FOR RESIDUE SO4 A1408
03
AC3
SOFTWARE
ASN C:296 , SER C:297 , GLU C:342 , SER C:387 , ASN C:388
BINDING SITE FOR RESIDUE NH4 C1406
04
AC4
SOFTWARE
ASN D:296 , SER D:297 , GLU D:342 , SER D:387 , ASN D:388
BINDING SITE FOR RESIDUE NH4 D1406
05
AC5
SOFTWARE
ASN B:296 , SER B:297 , GLU B:342 , SER B:387 , ASN B:388
BINDING SITE FOR RESIDUE NH4 D1407
06
AC6
SOFTWARE
ARG A:124 , GLN D:37 , LYS D:40
BINDING SITE FOR RESIDUE SO4 D1409
07
AC7
SOFTWARE
GLY A:106 , ALA A:162 , CYS A:163 , MET A:197 , GLU A:200 , PHE A:201 , GLY A:391 , PHE A:392 , GLN B:113 , ALA B:137 , MET B:138
BINDING SITE FOR RESIDUE DAO A1407
08
AC8
SOFTWARE
GLN A:113 , ALA A:137 , MET A:138 , GLY B:106 , GLY B:107 , PRO B:110 , ALA B:162 , CYS B:163 , MET B:197 , GLU B:200 , PHE B:201 , GLY B:391 , PHE B:392
BINDING SITE FOR RESIDUE DAO B1406
09
AC9
SOFTWARE
GLY C:106 , GLY C:107 , ALA C:162 , CYS C:163 , MET C:197 , GLU C:200 , PHE C:201 , GLY C:391 , PHE C:392 , ALA D:137
BINDING SITE FOR RESIDUE DAO C1407
10
BC1
SOFTWARE
ALA C:137 , MET C:138 , GLY D:106 , ALA D:162 , CYS D:163 , MET D:197 , GLU D:200 , PHE D:201 , GLY D:391 , PHE D:392
BINDING SITE FOR RESIDUE DAO D1408
[
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]
SAPs(SNPs)/Variants
(4, 16)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_FABB_ECOLI_001 (A4T, chain A/B/C/D, )
2: VAR_FABB_ECOLI_002 (S140F, chain A/B/C/D, )
3: VAR_FABB_ECOLI_003 (G299S, chain A/B/C/D, )
4: VAR_FABB_ECOLI_004 (A329V, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FABB_ECOLI_001
*
A
4
T
FABB_ECOLI
---
---
A/B/C/D
A
4
T
2
UniProt
VAR_FABB_ECOLI_002
*
S
140
F
FABB_ECOLI
---
---
A/B/C/D
S
140
F
3
UniProt
VAR_FABB_ECOLI_003
*
G
299
S
FABB_ECOLI
---
---
A/B/C/D
G
299
S
4
UniProt
VAR_FABB_ECOLI_004
*
A
329
V
FABB_ECOLI
---
---
A/B/C/D
A
329
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: B_KETOACYL_SYNTHASE (A:154-170,B:154-170,C:154-170,D:15...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FABB_ECOL6
154-170
4
A:154-170
B:154-170
C:154-170
D:154-170
FABB_ECOLI
154-170
4
A:154-170
B:154-170
C:154-170
D:154-170
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d2bz3a2 (A:254-406)
1b: SCOP_d2bz3b2 (B:254-406)
1c: SCOP_d2bz3c2 (C:254-406)
1d: SCOP_d2bz3d2 (D:254-406)
2a: SCOP_d2bz3a1 (A:1-253)
2b: SCOP_d2bz3b1 (B:1-253)
2c: SCOP_d2bz3c1 (C:1-253)
2d: SCOP_d2bz3d1 (D:1-253)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Escherichia coli [TaxId: 562]
(8)
1a
d2bz3a2
A:254-406
1b
d2bz3b2
B:254-406
1c
d2bz3c2
C:254-406
1d
d2bz3d2
D:254-406
Family
:
Thiolase-related
(67)
Protein domain
:
automated matches
(12)
Escherichia coli [TaxId: 562]
(6)
2a
d2bz3a1
A:1-253
2b
d2bz3b1
B:1-253
2c
d2bz3c1
C:1-253
2d
d2bz3d1
D:1-253
[
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_2bz3A02 (A:260-406)
1b: CATH_2bz3A01 (A:6-259)
1c: CATH_2bz3B01 (B:6-259)
1d: CATH_2bz3C01 (C:6-259)
1e: CATH_2bz3D01 (D:6-259)
1f: CATH_2bz3B02 (B:260-406)
1g: CATH_2bz3C02 (C:260-406)
1h: CATH_2bz3D02 (D:260-406)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Escherichia coli. Organism_taxid: 562.
(23)
1a
2bz3A02
A:260-406
1b
2bz3A01
A:6-259
1c
2bz3B01
B:6-259
1d
2bz3C01
C:6-259
1e
2bz3D01
D:6-259
1f
2bz3B02
B:260-406
1g
2bz3C02
C:260-406
1h
2bz3D02
D:260-406
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asym.Unit (268 KB)
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