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2BYW
Biol. Unit 2
Info
Asym.Unit (267 KB)
Biol.Unit 1 (134 KB)
Biol.Unit 2 (134 KB)
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(1)
Title
:
STRUCTURE OF ESCHERICHIA COLI BETA-KETOACYL (ACYL CARRIER PROTEIN) SYNTHASE I LYS328ALA MUTANT
Authors
:
J. G. Olsen, P. Von Wettstein-Knowles, A. Henriksen
Date
:
09 Aug 05 (Deposition) - 09 Sep 05 (Release) - 19 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Transferase, Condensing Enzyme, Fatty Acid Biosynthesis, Kas I, Acyltransferase, Lipid Synthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Von Wettstein-Knowles, J. G. Olsen, K. A. Mcguire, A. Henriksen
Fatty Acid Synthesis. Role Of Active Site Histidines And Lysine In Cys-His-His-Type Beta- Ketoacyl-Acyl Carrier Protein Synthases.
Febs J. V. 273 695 2006
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: AMMONIUM ION (NH4a)
1b: AMMONIUM ION (NH4b)
1c: AMMONIUM ION (NH4c)
1d: AMMONIUM ION (NH4d)
1e: AMMONIUM ION (NH4e)
1f: AMMONIUM ION (NH4f)
1g: AMMONIUM ION (NH4g)
1h: AMMONIUM ION (NH4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NH4
4
Ligand/Ion
AMMONIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
ASN C:296 , SER C:297 , GLU C:342 , SER C:387 , ASN C:388
BINDING SITE FOR RESIDUE NH4 C1407
2
AC6
SOFTWARE
HIS C:298 , HIS C:333 , GLU C:342
BINDING SITE FOR RESIDUE NH4 C1408
3
AC7
SOFTWARE
ASN D:296 , SER D:297 , GLU D:342 , SER D:387 , ASN D:388
BINDING SITE FOR RESIDUE NH4 D1407
4
AC8
SOFTWARE
HIS D:298 , THR D:300 , HIS D:333 , GLU D:342
BINDING SITE FOR RESIDUE NH4 D1408
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_FABB_ECOLI_001 (V4T, chain C/D, )
2: VAR_FABB_ECOLI_002 (S140F, chain C/D, )
3: VAR_FABB_ECOLI_003 (G299S, chain C/D, )
4: VAR_FABB_ECOLI_004 (A329V, chain C/D, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FABB_ECOLI_001
*
A
4
T
FABB_ECOLI
---
---
C/D
V
4
T
2
UniProt
VAR_FABB_ECOLI_002
*
S
140
F
FABB_ECOLI
---
---
C/D
S
140
F
3
UniProt
VAR_FABB_ECOLI_003
*
G
299
S
FABB_ECOLI
---
---
C/D
G
299
S
4
UniProt
VAR_FABB_ECOLI_004
*
A
329
V
FABB_ECOLI
---
---
C/D
A
329
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: B_KETOACYL_SYNTHASE (C:154-170,D:154-170)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FABB_ECOL6
154-170
2
-
-
C:154-170
D:154-170
FABB_ECOLI
154-170
2
-
-
C:154-170
D:154-170
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d2bywa2 (A:254-406)
1b: SCOP_d2bywb2 (B:254-406)
1c: SCOP_d2bywc2 (C:254-406)
1d: SCOP_d2bywd2 (D:254-406)
2a: SCOP_d2bywa1 (A:1-253)
2b: SCOP_d2bywb1 (B:1-253)
2c: SCOP_d2bywc1 (C:1-253)
2d: SCOP_d2bywd1 (D:1-253)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Escherichia coli [TaxId: 562]
(8)
1a
d2bywa2
A:254-406
1b
d2bywb2
B:254-406
1c
d2bywc2
C:254-406
1d
d2bywd2
D:254-406
Family
:
Thiolase-related
(67)
Protein domain
:
automated matches
(12)
Escherichia coli [TaxId: 562]
(6)
2a
d2bywa1
A:1-253
2b
d2bywb1
B:1-253
2c
d2bywc1
C:1-253
2d
d2bywd1
D:1-253
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_2bywA02 (A:260-404)
1b: CATH_2bywB02 (B:260-404)
1c: CATH_2bywC02 (C:260-404)
1d: CATH_2bywD02 (D:260-404)
1e: CATH_2bywA01 (A:6-259)
1f: CATH_2bywB01 (B:6-259)
1g: CATH_2bywC01 (C:6-259)
1h: CATH_2bywD01 (D:6-259)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Escherichia coli. Organism_taxid: 562.
(23)
1a
2bywA02
A:260-404
1b
2bywB02
B:260-404
1c
2bywC02
C:260-404
1d
2bywD02
D:260-404
1e
2bywA01
A:6-259
1f
2bywB01
B:6-259
1g
2bywC01
C:6-259
1h
2bywD01
D:6-259
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (267 KB)
Header - Asym.Unit
Biol.Unit 1 (134 KB)
Header - Biol.Unit 1
Biol.Unit 2 (134 KB)
Header - Biol.Unit 2
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