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Asym. Unit
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Asym.Unit (214 KB)
Biol.Unit 1 (205 KB)
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(1)
Title
:
STRUCTURE OF HUMAN GUANOSINE MONOPHOSPHATE REDUCTASE GMPR1 IN COMPLEX WITH GMP
Authors
:
G. Bunkoczi, A. Haroniti, S. Ng, F. Von Delft, O. Gileadi, U. Oppermann C. Arrowsmith, A. Edwards, M. Sundstrom
Date
:
13 Jul 05 (Deposition) - 20 Jul 05 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Nucleotide Pathway, Tim Barrel, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Bunkoczi, A. Haroniti, S. Ng, F. Von Delft, O. Gileadi, U. Oppermann, C. Arrowsmith, A. Edwards, M. Sundstrom
Structure Of Human Guanosine Monophosphate Reductase Gmpr1 In Complex With Gmp
To Be Published
[
close entry info
]
Hetero Components
(2, 8)
Info
All Hetero Components
1a: GUANOSINE-5'-MONOPHOSPHATE (5GPa)
1b: GUANOSINE-5'-MONOPHOSPHATE (5GPb)
1c: GUANOSINE-5'-MONOPHOSPHATE (5GPc)
1d: GUANOSINE-5'-MONOPHOSPHATE (5GPd)
2a: POTASSIUM ION (Ka)
2b: POTASSIUM ION (Kb)
2c: POTASSIUM ION (Kc)
2d: POTASSIUM ION (Kd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
5GP
4
Ligand/Ion
GUANOSINE-5'-MONOPHOSPHATE
2
K
4
Ligand/Ion
POTASSIUM ION
[
close Hetero Component info
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:181 , PRO A:182 , GLY A:183 , CYS A:186 , ARG A:189
BINDING SITE FOR RESIDUE K A1339
2
AC2
SOFTWARE
GLY B:181 , GLY B:183 , CYS B:186
BINDING SITE FOR RESIDUE K B1338
3
AC3
SOFTWARE
GLY C:181 , GLY C:183 , CYS C:186 , ARG C:189
BINDING SITE FOR RESIDUE K C1338
4
AC4
SOFTWARE
GLY D:181 , GLY D:183 , CYS D:186 , ARG D:189
BINDING SITE FOR RESIDUE K D1338
5
AC5
SOFTWARE
ALA A:53 , MET A:55 , GLY A:183 , SER A:184 , CYS A:186 , ASP A:219 , GLY A:220 , GLY A:221 , MET A:240 , LEU A:241 , GLY A:242 , GLY A:243 , GLY A:268 , MET A:269 , SER A:270 , ARG A:286 , ALA A:287 , SER A:288 , GLY A:290 , HOH A:2009 , HOH A:2046 , HOH A:2058 , HOH A:2059 , HOH A:2060
BINDING SITE FOR RESIDUE 5GP A1340
6
AC6
SOFTWARE
ALA B:53 , MET B:55 , ASN B:158 , GLY B:183 , SER B:184 , CYS B:186 , ASP B:219 , GLY B:220 , GLY B:221 , LEU B:241 , GLY B:242 , GLY B:243 , GLY B:268 , MET B:269 , SER B:270 , ARG B:286 , ALA B:287 , SER B:288 , GLY B:290 , HOH B:2010 , HOH B:2036 , HOH B:2049 , HOH B:2050
BINDING SITE FOR RESIDUE 5GP B1339
7
AC7
SOFTWARE
ALA C:53 , MET C:55 , ASN C:158 , GLY C:183 , SER C:184 , CYS C:186 , ASP C:219 , GLY C:220 , GLY C:221 , MET C:240 , GLY C:242 , GLY C:243 , GLY C:268 , MET C:269 , SER C:270 , ARG C:286 , SER C:288 , GLY C:290 , HOH C:2033 , HOH C:2046 , HOH C:2047
BINDING SITE FOR RESIDUE 5GP C1339
8
AC8
SOFTWARE
ALA D:53 , MET D:55 , ASN D:158 , GLY D:183 , SER D:184 , CYS D:186 , ASP D:219 , GLY D:220 , GLY D:221 , LEU D:241 , GLY D:242 , GLY D:243 , GLY D:268 , MET D:269 , SER D:270 , ARG D:286 , ALA D:287 , SER D:288 , GLY D:290 , HOH D:2029
BINDING SITE FOR RESIDUE 5GP D1339
[
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]
SAPs(SNPs)/Variants
(2, 8)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_003969 (A234T, chain A/B/C/D, )
2: VAR_003970 (I256I, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_003969
A
234
T
GMPR1_HUMAN
Polymorphism
---
A/B/C/D
A
234
T
2
UniProt
VAR_003970
F
256
I
GMPR1_HUMAN
Polymorphism
1042391
A/B/C/D
I
256
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: IMP_DH_GMP_RED (A:176-188,B:176-188,C:176-188,D:17...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IMP_DH_GMP_RED
PS00487
IMP dehydrogenase / GMP reductase signature.
GMPR1_HUMAN
176-188
4
A:176-188
B:176-188
C:176-188
D:176-188
[
close PROSITE info
]
Exons
(9, 36)
Info
All Exons
Exon 1.1 (A:2-29 | B:2-29 | C:2-29 | D:2-29)
Exon 1.2 (A:30-69 | B:30-69 | C:30-69 | D:30...)
Exon 1.3 (A:70-97 | B:70-97 | C:70-97 | D:70...)
Exon 1.4 (A:98-155 | B:98-155 | C:98-155 | D...)
Exon 1.5 (A:156-183 | B:156-183 | C:156-183 ...)
Exon 1.6 (A:183-218 | B:183-218 | C:183-218 ...)
Exon 1.7 (A:219-233 | B:219-233 | C:219-233 ...)
Exon 1.8 (A:233-286 (gaps) | B:233-286 (gaps...)
Exon 1.9 (A:286-338 | B:286-337 | C:286-337 ...)
View:
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Label:
All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9
10: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000259727
1
ENSE00000928733
chr6:
16238807-16239011
205
GMPR1_HUMAN
1-29
29
4
A:2-29
B:2-29
C:2-29
D:2-29
28
28
28
28
1.2
ENST00000259727
2
ENSE00000928732
chr6:
16247073-16247192
120
GMPR1_HUMAN
30-69
40
4
A:30-69
B:30-69
C:30-69
D:30-69
40
40
40
40
1.3
ENST00000259727
3
ENSE00000928731
chr6:
16250515-16250598
84
GMPR1_HUMAN
70-97
28
4
A:70-97
B:70-97
C:70-97
D:70-97
28
28
28
28
1.4
ENST00000259727
4
ENSE00000928730
chr6:
16254793-16254966
174
GMPR1_HUMAN
98-155
58
4
A:98-155
B:98-155
C:98-155
D:98-155
58
58
58
58
1.5
ENST00000259727
5
ENSE00001790043
chr6:
16274646-16274727
82
GMPR1_HUMAN
156-183
28
4
A:156-183
B:156-183
C:156-183
D:156-183
28
28
28
28
1.6
ENST00000259727
6
ENSE00000928728
chr6:
16279015-16279121
107
GMPR1_HUMAN
183-218
36
4
A:183-218
B:183-218
C:183-218
D:183-218
36
36
36
36
1.7
ENST00000259727
7
ENSE00000928727
chr6:
16286024-16286066
43
GMPR1_HUMAN
219-233
15
4
A:219-233
B:219-233
C:219-233
D:219-233
15
15
15
15
1.8
ENST00000259727
8
ENSE00000928726
chr6:
16290693-16290852
160
GMPR1_HUMAN
233-286
54
4
A:233-286 (gaps)
B:233-286 (gaps)
C:233-286 (gaps)
D:233-286 (gaps)
54
54
54
54
1.9
ENST00000259727
9
ENSE00000928725
chr6:
16295237-16295417
181
GMPR1_HUMAN
286-345
60
4
A:286-338
B:286-337
C:286-337
D:286-337
53
52
52
52
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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