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2BQQ
Biol. Unit 1
Info
Asym.Unit (24 KB)
Biol.Unit 1 (36 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
Authors
:
M. H. Kim, D. R. Cooper, U. Derewenda, Z. S. Derewenda
Date
:
27 Apr 05 (Deposition) - 19 Jul 06 (Release) - 01 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Dcx Domain, Ubiquitin-Like Fold, Microtubule Associated, Signaling Protein, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Cierpicki, M. H. Kim, D. R. Cooper, U. Derewenda, J. H. Bushweller, Z. S. Derewenda
The Dc-Module Of Doublecortin: Dynamics, Domain Boundaries, And Functional Implications.
Proteins V. 64 874 2006
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(16, 32)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_007822 (R59H, chain A, )
02: VAR_007821 (R59L, chain A, )
03: VAR_026024 (N60D, chain A, )
04: VAR_007823 (D62N, chain A, )
05: VAR_026025 (G67E, chain A, )
06: VAR_026026 (A71S, chain A, )
07: VAR_010202 (R78H, chain A, )
08: VAR_007824 (R78L, chain A, )
09: VAR_007825 (D86H, chain A, )
10: VAR_010536 (R89G, chain A, )
11: VAR_026027 (L97R, chain A, )
12: VAR_007826 (G100A, chain A, )
13: VAR_007827 (R102S, chain A, )
14: VAR_026028 (I104T, chain A, )
15: VAR_007829 (Y125D, chain A, )
16: VAR_007828 (Y125H, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_007822
R
140
H
DCX_HUMAN
Disease (SBHX)
---
A
R
59
H
02
UniProt
VAR_007821
R
140
L
DCX_HUMAN
Disease (SBHX)
---
A
R
59
L
03
UniProt
VAR_026024
N
141
D
DCX_HUMAN
Disease (LISX1)
---
A
N
60
D
04
UniProt
VAR_007823
D
143
N
DCX_HUMAN
Disease (SBHX)
---
A
D
62
N
05
UniProt
VAR_026025
G
148
E
DCX_HUMAN
Disease (SBHX)
---
A
G
67
E
06
UniProt
VAR_026026
A
152
S
DCX_HUMAN
Disease (LISX1)
---
A
A
71
S
07
UniProt
VAR_010202
R
159
H
DCX_HUMAN
Unclassified
---
A
R
78
H
08
UniProt
VAR_007824
R
159
L
DCX_HUMAN
Disease (SBHX)
---
A
R
78
L
09
UniProt
VAR_007825
D
167
H
DCX_HUMAN
Disease (SBHX)
---
A
D
86
H
10
UniProt
VAR_010536
R
170
G
DCX_HUMAN
Disease (SBHX)
---
A
R
89
G
11
UniProt
VAR_026027
L
178
R
DCX_HUMAN
Disease (SBHX)
---
A
L
97
R
12
UniProt
VAR_007826
G
181
A
DCX_HUMAN
Disease (SBHX)
---
A
G
100
A
13
UniProt
VAR_007827
R
183
S
DCX_HUMAN
Disease (LISX1)
---
A
R
102
S
14
UniProt
VAR_026028
I
185
T
DCX_HUMAN
Disease (SBHX)
---
A
I
104
T
15
UniProt
VAR_007829
Y
206
D
DCX_HUMAN
Disease (SBHX)
---
A
Y
125
D
16
UniProt
VAR_007828
Y
206
H
DCX_HUMAN
Disease (SBHX)
---
A
Y
125
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: DC (A:53-139|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DC
PS50309
Doublecortin domain profile.
DCX_HUMAN
53-139
180-263
2
A:53-139
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2bqqa_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Doublecortin (DC)
(5)
Family
:
Doublecortin (DC)
(5)
Protein domain
:
automated matches
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2bqqa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2bqqA00 (A:52-147)
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Homologous Superfamilies
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)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
[code=3.10.20.230, no name defined]
(5)
Human (Homo sapiens)
(5)
1a
2bqqA00
A:52-147
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Pfam Domains
(0, 0)
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all PFAM domains
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