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2BN0
Biol. Unit 1
Info
Asym.Unit (53 KB)
Biol.Unit 1 (49 KB)
Biol.Unit 2 (48 KB)
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(1)
Title
:
BANANA LECTIN BOUND TO LAMINARIBIOSE
Authors
:
J. L. Meagher, H. C. Winter, P. Ezell, I. J. Goldstein, J. A. Stuckey
Date
:
17 Mar 05 (Deposition) - 16 Jun 05 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Mannose-Specific Jacalin-Related Lectin, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. L. Meagher, H. C. Winter, P. Ezell, I. J. Goldstein, J. A. Stuckey
Crystal Structure Of Banana Lectin Reveals A Novel Second Sugar Binding Site.
Glycobiology V. 15 1033 2005
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
1e: BETA-D-GLUCOSE (BGCe)
1f: BETA-D-GLUCOSE (BGCf)
1g: BETA-D-GLUCOSE (BGCg)
1h: BETA-D-GLUCOSE (BGCh)
2a: CADMIUM ION (CDa)
2b: CADMIUM ION (CDb)
3a: SULFATE ION (SO4a)
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Label:
No.
Name
Count
Type
Full Name
1
BGC
4
Ligand/Ion
BETA-D-GLUCOSE
2
CD
-1
Ligand/Ion
CADMIUM ION
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:41 , HIS A:54 , HIS B:84
BINDING SITE FOR RESIDUE CD A1143
2
AC2
SOFTWARE
HIS A:84 , GLU B:64 , HOH B:2043
BINDING SITE FOR RESIDUE CD A1144
3
AC3
SOFTWARE
SER A:16 , ALA A:17 , ARG A:127
BINDING SITE FOR RESIDUE SO4 A1148
4
AC4
SOFTWARE
GLY A:14 , GLY A:15 , GLY A:129 , LYS A:130 , PHE A:131 , ASP A:133 , HOH A:2089
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC A1142 THROUGH BGC A1145
5
AC5
SOFTWARE
GLY A:34 , ASP A:35 , VAL A:36 , ASP A:38 , GLY A:59 , GLY A:60 , THR A:61 , PHE A:131 , HOH A:2093
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC A1146 THROUGH BGC A1147
6
AC6
SOFTWARE
GLY B:14 , GLY B:15 , GLY B:129 , LYS B:130 , PHE B:131 , ASP B:133 , HOH B:2099
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC B1142 THROUGH BGC B1143
7
AC7
SOFTWARE
GLY B:34 , ASP B:35 , VAL B:36 , ASP B:38 , GLY B:59 , GLY B:60 , THR B:61 , PHE B:131
BINDING SITE FOR POLY-SACCHARIDE RESIDUES BGC B1144 THROUGH BGC B1145
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2bn0a_ (A:)
1b: SCOP_d2bn0b_ (B:)
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Protein Domains
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(
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Prism I
(50)
Superfamily
:
Mannose-binding lectins
(42)
Family
:
automated matches
(10)
Protein domain
:
automated matches
(10)
Musa acuminata [TaxId: 4641]
(6)
1a
d2bn0a_
A:
1b
d2bn0b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2bn0A00 (A:1-141)
1b: CATH_2bn0B00 (B:3-141)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Aligned Prism
(39)
Topology
:
Vitelline Membrane Outer Layer Protein I, subunit A
(39)
Homologous Superfamily
:
[code=2.100.10.30, no name defined]
(33)
Banana (Musa acuminata)
(3)
1a
2bn0A00
A:1-141
1b
2bn0B00
B:3-141
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Pfam Domains
(0, 0)
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Show PDB file:
Asym.Unit (53 KB)
Header - Asym.Unit
Biol.Unit 1 (49 KB)
Header - Biol.Unit 1
Biol.Unit 2 (48 KB)
Header - Biol.Unit 2
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