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Asym. Unit
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Asym.Unit (93 KB)
Biol.Unit 1 (88 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE BIFUNCTIONAL 6-HYDROXYMETHYL-7,8-DIHYDROXYPTERIN PYROPHOSPHOKINASE DIHYDROPTEROATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE
Authors
:
M. C. Lawrence, P. Iliades, R. T. Fernley, J. Berglez, P. A. Pilling, I. G. Macreadie
Date
:
11 Mar 05 (Deposition) - 17 Jan 06 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Folate Biosynthesis, Transferase, Ligase, Multifunctional Enzyme
(Keyword Search:
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Reference
:
M. C. Lawrence, P. Iliades, R. T. Fernley, J. Berglez, P. A. Pilling, I. G. Macreadie
The Three-Dimensional Structure Of The Bifunctional 6-Hydroxymethyl-7, 8-Dihydropterin Pyrophosphokinase/Dihydropteroate Synthase Of Saccharomyces Cerevisiae
J. Mol. Biol. V. 348 655 2005
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PTERIN-6-YL-METHYL-MONOPHOSPHATE (PMMa)
1b: PTERIN-6-YL-METHYL-MONOPHOSPHATE (PMMb)
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No.
Name
Count
Type
Full Name
1
PMM
2
Ligand/Ion
PTERIN-6-YL-METHYL-MONOPHOSPHATE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:597 , ARG A:598 , ASP A:636 , ASN A:655 , ILE A:657 , ASP A:755 , PHE A:760 , LEU A:801 , GLY A:803 , LYS A:807 , ARG A:842 , HIS A:844 , HOH A:2097 , HOH A:2115
BINDING SITE FOR RESIDUE PMM A1865
2
AC2
SOFTWARE
SER A:379 , GLU A:380 , PRO A:381 , MET A:382 , TYR A:383 , PHE A:390 , ASN A:392 , ASP A:434 , ARG A:463 , PHE A:465 , ASN A:698 , HOH A:2009
BINDING SITE FOR RESIDUE PMM A1866
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(4, 4)
Info
All PROSITE Patterns/Profiles
1: HPPK (A:430-436)
2: PTERIN_BINDING (A:544-854)
3: DHPS_1 (A:546-561)
4: DHPS_2 (A:586-599)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HPPK
PS00794
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature.
FOL1_YEAST
385-396
1
A:430-436
2
PTERIN_BINDING
PS50972
Pterin-binding domain profile.
FOL1_YEAST
504-814
1
A:544-854
3
DHPS_1
PS00792
Dihydropteroate synthase signature 1.
FOL1_YEAST
506-521
1
A:546-561
4
DHPS_2
PS00793
Dihydropteroate synthase signature 2.
FOL1_YEAST
546-559
1
A:586-599
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Exons
(1, 1)
Info
All Exons
Exon 1.1 (A:336-864 (gaps))
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YNL256W
1
YNL256W.1
XIV:164624-167098
2475
FOL1_YEAST
1-824
824
1
A:336-864 (gaps)
529
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SCOP Domains
(0, 0)
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2bmbA02 (A:543-864)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Dihydropteroate (DHP) synthetase
(30)
Baker's yeast (Saccharomyces cerevisiae)
(1)
1a
2bmbA02
A:543-864
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (93 KB)
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