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2BKY
Asym. Unit
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Asym.Unit (73 KB)
Biol.Unit 1 (67 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ALBA1:ALBA2 HETERODIMER FROM SULFOLOBUS SOLFATARICUS
Authors
:
C. Jelinska, M. J. Conroy, C. J. Craven, P. A. Bullough, J. P. Waltho, G. L M. F. White
Date
:
22 Feb 05 (Deposition) - 14 Jul 05 (Release) - 01 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,X,Y
Biol. Unit 1: A,B,X,Y (1x)
Keywords
:
Archaeal Dna Binding Protein, Dna Condensation, Dna-Binding, Rna-Binding, Dna Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Jelinska, M. J. Conroy, C. J. Craven, A. M. Hounslow, P. A. Bullough, J. P. Waltho, G. L. Taylor, M. F. White
Obligate Heterodimerization Of The Archaeal Alba2 Protein With Alba1 Provides A Mechanism For Control Of Dna Packaging.
Structure V. 13 963 2005
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
1b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
1c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
1d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
1e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
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No.
Name
Count
Type
Full Name
1
MPD
5
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:78 , SER A:79 , GLY A:82 , HOH A:2033 , ASN Y:65 , VAL Y:66 , GLN Y:67 , MPD Y:1090
BINDING SITE FOR RESIDUE MPD A1098
2
AC2
SOFTWARE
ASP A:51 , HOH A:2088 , ARG X:41 , HOH X:2041
BINDING SITE FOR RESIDUE MPD A1099
3
AC3
SOFTWARE
THR B:78 , SER B:79 , HOH B:2092 , HOH B:2093 , ASN X:65 , VAL X:66 , GLN X:67
BINDING SITE FOR RESIDUE MPD B1098
4
AC4
SOFTWARE
ARG Y:75
BINDING SITE FOR RESIDUE MPD X1090
5
AC5
SOFTWARE
GLN A:80 , MPD A:1098 , ILE B:67 , ILE B:70 , ASN Y:65 , VAL Y:66 , GLN Y:67 , HOH Y:2062
BINDING SITE FOR RESIDUE MPD Y1090
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2bkya_ (A:)
1b: SCOP_d2bkyb_ (B:)
2a: SCOP_d2bkyx_ (X:)
2b: SCOP_d2bkyy_ (Y:)
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IF3-like
(127)
Superfamily
:
AlbA-like
(17)
Family
:
DNA-binding protein AlbA
(13)
Protein domain
:
automated matches
(5)
Sulfolobus solfataricus [TaxId: 273057]
(1)
1a
d2bkya_
A:
1b
d2bkyb_
B:
Protein domain
:
DNA-binding protein AlbA
(8)
Sulfolobus solfataricus, Sso10b2 [TaxId: 2287]
(3)
2a
d2bkyx_
X:
2b
d2bkyy_
Y:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2bkyA00 (A:9-97)
1b: CATH_2bkyB00 (B:9-97)
1c: CATH_2bkyX00 (X:4-89)
1d: CATH_2bkyY00 (Y:4-89)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Translation Initiation Factor IF3
(34)
Homologous Superfamily
:
[code=3.30.110.20, no name defined]
(13)
Sulfolobus solfataricus. Organism_taxid: 273057. Strain: p2.
(1)
1a
2bkyA00
A:9-97
1b
2bkyB00
B:9-97
1c
2bkyX00
X:4-89
1d
2bkyY00
Y:4-89
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (73 KB)
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