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2BJS
Asym. Unit
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Asym.Unit (72 KB)
Biol.Unit 1 (65 KB)
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(1)
Title
:
ISOPENICILLIN N SYNTHASE C-TERMINAL TRUNCATION MUTANT
Authors
:
L. A. Mcneill, M. Sami, I. J. Clifton, N. I. Burzlaff
Date
:
07 Feb 05 (Deposition) - 09 Mar 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Antibiotic Biosynthesis, B-Lactam Antibiotic, Iron, Oxygenase, Penicillin Biosynthesis, Vitamin C
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. A. Mcneill, M. Sami, T. J. N. Brown, I. J. Clifton, N. I. Burzlaff, C. J. Schofield, R. M. Adlington, J. E. Baldwin
Structure Of An Isopenicillin N Synthase C- Terminal Truncation Mutant
To Be Published
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Hetero Components
(4, 5)
Info
All Hetero Components
1a: L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D... (ACVa)
1b: L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D... (ACVb)
2a: FE (III) ION (FEa)
3a: METHANETHIOL (MEEa)
4a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACV
2
Ligand/Ion
L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE
2
FE
1
Ligand/Ion
FE (III) ION
3
MEE
1
Ligand/Ion
METHANETHIOL
4
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:214 , ASP A:216 , HIS A:270 , ACV A:1324 , HOH A:2402 , HOH A:2408
BINDING SITE FOR RESIDUE FE A1323
2
AC2
SOFTWARE
ARG A:53 , ASP A:140 , PHE A:141 , HOH A:2301 , HOH A:2317 , HOH A:2542 , HOH A:2543 , HOH A:2544 , HOH A:2545
BINDING SITE FOR RESIDUE SO4 A1327
3
AC3
SOFTWARE
ARG A:87 , TYR A:91 , SER A:183 , ILE A:187 , TYR A:189 , PHE A:211 , HIS A:214 , ASP A:216 , LEU A:223 , VAL A:272 , SER A:281 , PRO A:283 , PHE A:285 , FE A:1323 , ACV A:1325 , HOH A:2402 , HOH A:2408 , HOH A:2533 , HOH A:2534 , HOH A:2536 , HOH A:2537 , HOH A:2538 , HOH A:2539
BINDING SITE FOR RESIDUE ACV A1324
4
AC4
SOFTWARE
TYR A:91 , LYS A:98 , GLU A:101 , SER A:102 , ACV A:1324 , MEE A:1326 , HOH A:2189 , HOH A:2537 , HOH A:2539 , HOH A:2540 , HOH A:2541
BINDING SITE FOR RESIDUE ACV A1325
5
AC5
SOFTWARE
ACV A:1325 , HOH A:2014 , HOH A:2030
BINDING SITE FOR RESIDUE MEE A1326
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: IPNS_1 (A:97-106)
2: FE2OG_OXY (A:176-288)
3: IPNS_2 (A:250-263)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IPNS_1
PS00185
Isopenicillin N synthase signature 1.
IPNS_EMENI
97-106
1
A:97-106
2
FE2OG_OXY
PS51471
Fe(2+) 2-oxoglutarate dioxygenase domain profile.
IPNS_EMENI
176-288
1
A:176-288
3
IPNS_2
PS00186
Isopenicillin N synthase signature 2.
IPNS_EMENI
250-263
1
A:250-263
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2bjsa_ (A:)
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(
)
(
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Folds
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)
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(
)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
Clavaminate synthase-like
(197)
Family
:
Penicillin synthase-like
(62)
Protein domain
:
automated matches
(15)
Emericella nidulans [TaxId: 162425]
(12)
1a
d2bjsa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2bjsA00 (A:3-322)
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Topologies
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
B-lactam Antibiotic, Isopenicillin N Synthase; Chain
(59)
Emericella nidulans. Organism_taxid: 162425.
(10)
1a
2bjsA00
A:3-322
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein
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Chain A
Asymmetric Unit 1
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