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2BI4
Asym. Unit
Info
Asym.Unit (124 KB)
Biol.Unit 1 (118 KB)
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(1)
Title
:
LACTALDEHYDE:1,2-PROPANEDIOL OXIDOREDUCTASE OF ESCHERICHIA COLI
Authors
:
C. Montella, L. Bellsolell, J. Badia, L. Baldoma, R. Perez, M. Coll, J. Aguilar
Date
:
20 Jan 05 (Deposition) - 06 Jul 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Fuco, Group Iii Dehydrogenase, Metalo-Enzymes, Dinucleotide Cofactor Specificity, Oxidoreductase, Iron, Nad
(Keyword Search:
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Reference
:
C. Montella, L. Bellsolell, R. Perez-Luque, J. Badia, L. Baldoma, M. Coll, J. Aguilar
Crystal Structure Of An Iron-Dependent Group Iii Dehydrogenase That Interconverts L-Lactaldehyde And L-1, 2-Propanediol In Escherichia Coli
J. Bacteriol. V. 187 4957 2005
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: FE (III) ION (FEa)
2b: FE (III) ION (FEb)
3a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
3b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
FE
2
Ligand/Ion
FE (III) ION
3
NAD
2
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:196 , HIS A:200 , HIS A:263 , HIS A:277 , ASN A:281 , NAD A:1385
BINDING SITE FOR RESIDUE FE A1384
2
AC2
SOFTWARE
LYS A:33
BINDING SITE FOR RESIDUE CL B 500
3
AC3
SOFTWARE
ASP B:1196 , HIS B:1200 , HIS B:1263 , HIS B:1277 , ASN B:1281 , NAD B:2385
BINDING SITE FOR RESIDUE FE B2384
4
AC4
SOFTWARE
ASP A:39 , THR A:41 , LEU A:42 , GLY A:97 , GLY A:98 , SER A:99 , THR A:140 , THR A:141 , THR A:144 , VAL A:153 , LYS A:162 , MET A:181 , GLY A:184 , MET A:185 , LEU A:189 , ASP A:196 , HIS A:200 , PHE A:254 , LEU A:259 , HIS A:263 , HIS A:277 , FE A:1384 , ASP B:1342
BINDING SITE FOR RESIDUE NAD A1385
5
AC5
SOFTWARE
ASP A:342 , ASP B:1039 , THR B:1041 , LEU B:1042 , ASN B:1071 , GLY B:1097 , GLY B:1098 , SER B:1099 , PRO B:1100 , THR B:1140 , THR B:1141 , THR B:1144 , ASN B:1151 , VAL B:1153 , LYS B:1162 , MET B:1181 , GLY B:1184 , MET B:1185 , LEU B:1189 , ASP B:1196 , HIS B:1200 , PHE B:1254 , HIS B:1263 , HIS B:1277 , FE B:2384
BINDING SITE FOR RESIDUE NAD B2385
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: ADH_IRON_1 (A:175-203,B:1175-1203,A:175-203,B:...)
2: ADH_IRON_2 (A:260-280,B:1260-1280,A:260-280,B:...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_IRON_1
PS00913
Iron-containing alcohol dehydrogenases signature 1.
FUCO_ECO57
174-202
2
A:175-203
B:1175-1203
FUCO_ECOLI
174-202
2
A:175-203
B:1175-1203
2
ADH_IRON_2
PS00060
Iron-containing alcohol dehydrogenases signature 2.
FUCO_ECO57
259-279
2
A:260-280
B:1260-1280
FUCO_ECOLI
259-279
2
A:260-280
B:1260-1280
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2bi4a_ (A:)
1b: SCOP_d2bi4b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Dehydroquinate synthase-like
(30)
Superfamily
:
Dehydroquinate synthase-like
(30)
Family
:
Iron-containing alcohol dehydrogenase
(11)
Protein domain
:
automated matches
(2)
Escherichia coli [TaxId: 562]
(2)
1a
d2bi4a_
A:
1b
d2bi4b_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2bi4A01 (A:2-186)
1b: CATH_2bi4B01 (B:1002-1186)
2a: CATH_2bi4A02 (A:187-383)
2b: CATH_2bi4B02 (B:1187-1383)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1970, no name defined]
(28)
Escherichia coli. Organism_taxid: 562. Strain: ecl1.
(2)
1a
2bi4A01
A:2-186
1b
2bi4B01
B:1002-1186
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Dehydroquinate synthase-like, alpha domain
(24)
Homologous Superfamily
:
Dehydroquinate synthase-like - alpha domain
(24)
Escherichia coli. Organism_taxid: 562. Strain: ecl1.
(2)
2a
2bi4A02
A:187-383
2b
2bi4B02
B:1187-1383
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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