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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
2B90
Asym. Unit
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Asym.Unit (29 KB)
Biol.Unit 1 (25 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE INTERLEUKIN-4 VARIANT T13DR85A
Authors
:
M. Kraich, M. Klein, E. Patino, H. Harrer, W. Sebald, T. D. Mueller
Date
:
10 Oct 05 (Deposition) - 30 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Four Helix Bundle, Cytokine
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Kraich, M. Klein, E. Patino, H. Harrer, J. Nickel, W. Sebald, T. D. Mueller
A Modular Interface Of Il-4 Allows For Scalable Affinity Without Affecting Specificity For The Il-4 Receptor
Bmc Biol. V. 4 13 2006
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
View:
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Label:
No.
Name
Count
Type
Full Name
1
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:53 , TYR A:56 , ASP A:62 , THR A:63 , HOH A:1025 , HOH A:1039
BINDING SITE FOR RESIDUE SO4 A 1004
2
AC2
SOFTWARE
HIS A:59 , ARG A:64 , HOH A:1009 , HOH A:1012
BINDING SITE FOR RESIDUE SO4 A 1005
3
AC3
SOFTWARE
HIS A:74 , LYS A:77 , ARG A:81
BINDING SITE FOR RESIDUE SO4 A 1006
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_020392 (C3R, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_020392
C
27
R
IL4_HUMAN
Polymorphism
4986964
A
C
3
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: INTERLEUKIN_4_13 (A:7-32)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INTERLEUKIN_4_13
PS00838
Interleukins -4 and -13 signature.
IL4_HUMAN
31-56
1
A:7-32
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Exons
(4, 4)
Info
All Exons
Exon 1.1a (A:1-21)
Exon 1.2b (A:22-37)
Exon 1.3b (A:38-96)
Exon 1.4b (A:97-129)
View:
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All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.2b
3: Boundary 1.2b/1.3b
4: Boundary 1.3b/1.4b
5: Boundary 1.4b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000231449
1a
ENSE00001334422
chr5:
132009678-132009877
200
IL4_HUMAN
1-45
45
1
A:1-21
21
1.2b
ENST00000231449
2b
ENSE00000763068
chr5:
132010151-132010198
48
IL4_HUMAN
46-61
16
1
A:22-37
16
1.3b
ENST00000231449
3b
ENSE00000763067
chr5:
132015406-132015582
177
IL4_HUMAN
62-120
59
1
A:38-96
59
1.4b
ENST00000231449
4b
ENSE00000854399
chr5:
132018178-132018368
191
IL4_HUMAN
121-153
33
1
A:97-129
33
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2b90a_ (A:)
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)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
4-helical cytokines
(168)
Superfamily
:
4-helical cytokines
(168)
Family
:
Short-chain cytokines
(78)
Protein domain
:
automated matches
(16)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d2b90a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2b90A00 (A:1-129)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Growth Hormone; Chain: A;
(136)
Homologous Superfamily
:
[code=1.20.1250.10, no name defined]
(130)
Human (Homo sapiens)
(110)
1a
2b90A00
A:1-129
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain A
Asymmetric Unit 1
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