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2ASG
Theor. Model
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Theoretical Model (21 KB)
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(1)
Title
:
BINDING DOMAIN OF NON-COMPETITIVE INHIBITORS IN THE ALPHA3BETA4 SUBTYPE OF NICOTINIC ACETYLCHOLINE RECEPTOR
Authors
:
K. Jozwiak, S. Ravichandran, J. R. Collins, I. W. Wainer
Date
:
23 Aug 05 (Deposition) - 13 Sep 05 (Release) - 13 Sep 05 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,B,C,D,E
Keywords
:
Ion-Channel, Lumen, Alpha3Beta4, Nachr
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Jozwiak, S. Ravichandran, J. R. Collins, I. W. Wainer
Interaction Of Noncompetitive Inhibitors With An Immobilized 34 Nicotinic Acetylcholine Receptor Investigated By Affinity Chromatography, Quantitative-Structure Activity Relationship Analysis, And Molecular Docking
J. Med. Chem. V. 47 4008 2004
(for further references see the
PDB file header
)
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
1d: ACETYL GROUP (ACEd)
1e: ACETYL GROUP (ACEe)
2a: METHYLAMINE (NMEa)
2b: METHYLAMINE (NMEb)
2c: METHYLAMINE (NMEc)
2d: METHYLAMINE (NMEd)
2e: METHYLAMINE (NMEe)
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No.
Name
Count
Type
Full Name
1
ACE
5
Mod. Amino Acid
ACETYL GROUP
2
NME
5
Mod. Amino Acid
METHYLAMINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(2, 5)
Info
All Exons
Exon 1.5 (B:26-50 | D:76-100 | E:101-125)
Exon 2.5a (A:1-25 | C:51-75)
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All Exon Boundaries
1: Boundary 1.4/1.5
2: Boundary 1.5/1.6b
3: Boundary 2.4/2.5a
4: Boundary 2.5a/2.6b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261751
1
ENSE00001316093
chr15:
78933587-78933421
167
ACHB4_HUMAN
1-19
19
0
-
-
1.2
ENST00000261751
2
ENSE00001262666
chr15:
78927929-78927781
149
ACHB4_HUMAN
19-68
50
0
-
-
1.3
ENST00000261751
3
ENSE00000794045
chr15:
78923674-78923630
45
ACHB4_HUMAN
69-83
15
0
-
-
1.4
ENST00000261751
4
ENSE00000794044
chr15:
78923527-78923418
110
ACHB4_HUMAN
84-120
37
0
-
-
1.5
ENST00000261751
5
ENSE00001262649
chr15:
78922287-78921309
979
ACHB4_HUMAN
120-446
327
3
B:26-50
D:76-100
E:101-125
25
25
25
1.6b
ENST00000261751
6b
ENSE00001664559
chr15:
78917633-78916461
1173
ACHB4_HUMAN
447-498
52
0
-
-
2.1b
ENST00000326828
1b
ENSE00001423049
chr15:
78913521-78913055
467
ACHA3_HUMAN
1-28
28
0
-
-
2.2
ENST00000326828
2
ENSE00001269374
chr15:
78911257-78911118
140
ACHA3_HUMAN
28-74
47
0
-
-
2.3
ENST00000326828
3
ENSE00000794039
chr15:
78911003-78910959
45
ACHA3_HUMAN
75-89
15
0
-
-
2.4
ENST00000326828
4
ENSE00000794038
chr15:
78909475-78909366
110
ACHA3_HUMAN
90-126
37
0
-
-
2.5a
ENST00000326828
5a
ENSE00001160226
chr15:
78894606-78893595
1012
ACHA3_HUMAN
126-463
338
2
A:1-25
C:51-75
25
25
2.6b
ENST00000326828
6b
ENSE00001931017
chr15:
78889074-78887350
1725
ACHA3_HUMAN
464-505
42
0
-
-
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Pfam Domains
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