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2ARF
Asym. Unit
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Asym.Unit (414 KB)
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Models
(10 )
Title
:
SOLUTION STRUCTURE OF THE WILSON ATPASE N-DOMAIN IN THE PRESENCE OF ATP
Authors
:
O. Dmitriev, R. Tsivkovskii, F. Abildgaard, C. T. Morgan, J. L. Markley, S. Lutsenko
Date
:
19 Aug 05 (Deposition) - 28 Feb 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Keywords
:
Atpase, Wilson Disease, P-Type Atpase, Atp7B, Copper Transport, Nucleotide Binding, Atp Binding, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. Dmitriev, R. Tsivkovskii, F. Abildgaard, C. T. Morgan, J. L. Markley, S. Lutsenko
Solution Structure Of The N-Domain Of Wilson Disease Protein: Distinct Nucleotide-Binding Environment And Effects Of Disease Mutations
Proc. Natl. Acad. Sci. Usa V. 103 5302 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(50, 50)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
01: VAR_044474 (A1032I, chain A, )
02: VAR_000753 (M1035V, chain A, )
03: VAR_010015 (R1038K, chain A, )
04: VAR_009015 (R1041P, chain A, )
05: VAR_000754 (R1041W, chain A, )
06: VAR_000755 (L1043P, chain A, )
07: VAR_009016 (P1052L, chain A, )
08: VAR_009017 (G1061E, chain A, )
09: VAR_009018 (A1063V, chain A, )
10: VAR_000756 (E1064A, chain A, )
11: VAR_000757 (E1064K, chain A, )
12: VAR_044475 (A1065P, chain A, )
13: VAR_009019 (E1068G, chain A, )
14: VAR_000758 (H1069Q, chain A, )
15: VAR_000759 (L1083F, chain A, )
16: VAR_000760 (G1089E, chain A, )
17: VAR_000761 (G1089V, chain A, )
18: VAR_023029 (F1094L, chain A, )
19: VAR_009020 (Q1095P, chain A, )
20: VAR_023030 (P1098R, chain A, )
21: VAR_023031 (G1099S, chain A, )
22: VAR_000762 (G1101R, chain A, )
23: VAR_000763 (I1102T, chain A, )
24: VAR_009021 (C1104F, chain A, )
25: VAR_044476 (C1104Y, chain A, )
26: VAR_010017 (V1106D, chain A, )
27: VAR_044477 (V1106I, chain A, )
28: VAR_000764 (V1109M, chain A, )
29: VAR_023032 (G1111D, chain A, )
30: VAR_000765 (V1140A, chain A, )
31: VAR_000766 (Q1142H, chain A, )
32: VAR_023033 (T1143N, chain A, )
33: VAR_000767 (V1146M, chain A, )
34: VAR_000768 (I1148T, chain A, )
35: VAR_058930 (G1149A, chain A, )
36: VAR_009022 (R1151H, chain A, )
37: VAR_000769 (W1153C, chain A, )
38: VAR_010018 (W1153R, chain A, )
39: VAR_058931 (D1164N, chain A, )
40: VAR_023034 (A1168S, chain A, )
41: VAR_009023 (M1169T, chain A, )
42: VAR_000770 (M1169V, chain A, )
43: VAR_058932 (E1173G, chain A, )
44: VAR_009024 (E1173K, chain A, )
45: VAR_044478 (G1176E, chain A, )
46: VAR_010019 (G1176R, chain A, )
47: VAR_000771 (A1183G, chain A, )
48: VAR_000772 (A1183T, chain A, )
49: VAR_000773 (G1186C, chain A, )
50: VAR_000774 (G1186S, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_044474
T
1029
I
ATP7B_HUMAN
Disease (WD)
---
A
A
1032
I
02
UniProt
VAR_000753
G
1035
V
ATP7B_HUMAN
Disease (WD)
---
A
M
1035
V
03
UniProt
VAR_010015
R
1038
K
ATP7B_HUMAN
Disease (WD)
59959366
A
R
1038
K
04
UniProt
VAR_009015
R
1041
P
ATP7B_HUMAN
Disease (WD)
---
A
R
1041
P
05
UniProt
VAR_000754
R
1041
W
ATP7B_HUMAN
Unclassified
---
A
R
1041
W
06
UniProt
VAR_000755
L
1043
P
ATP7B_HUMAN
Disease (WD)
---
A
L
1043
P
07
UniProt
VAR_009016
P
1052
L
ATP7B_HUMAN
Disease (WD)
---
A
P
1052
L
08
UniProt
VAR_009017
G
1061
E
ATP7B_HUMAN
Disease (WD)
---
A
G
1061
E
09
UniProt
VAR_009018
A
1063
V
ATP7B_HUMAN
Disease (WD)
---
A
A
1063
V
10
UniProt
VAR_000756
E
1064
A
ATP7B_HUMAN
Disease (WD)
---
A
E
1064
A
11
UniProt
VAR_000757
E
1064
K
ATP7B_HUMAN
Disease (WD)
---
A
E
1064
K
12
UniProt
VAR_044475
A
1065
P
ATP7B_HUMAN
Disease (WD)
---
A
A
1065
P
13
UniProt
VAR_009019
E
1068
G
ATP7B_HUMAN
Disease (WD)
---
A
E
1068
G
14
UniProt
VAR_000758
H
1069
Q
ATP7B_HUMAN
Disease (WD)
---
A
H
1069
Q
15
UniProt
VAR_000759
L
1083
F
ATP7B_HUMAN
Disease (WD)
---
A
L
1083
F
16
UniProt
VAR_000760
G
1089
E
ATP7B_HUMAN
Disease (WD)
---
A
G
1089
E
17
UniProt
VAR_000761
G
1089
V
ATP7B_HUMAN
Disease (WD)
---
A
G
1089
V
18
UniProt
VAR_023029
F
1094
L
ATP7B_HUMAN
Disease (WD)
---
A
F
1094
L
19
UniProt
VAR_009020
Q
1095
P
ATP7B_HUMAN
Disease (WD)
---
A
Q
1095
P
20
UniProt
VAR_023030
P
1098
R
ATP7B_HUMAN
Disease (WD)
---
A
P
1098
R
21
UniProt
VAR_023031
G
1099
S
ATP7B_HUMAN
Disease (WD)
---
A
G
1099
S
22
UniProt
VAR_000762
G
1101
R
ATP7B_HUMAN
Disease (WD)
---
A
G
1101
R
23
UniProt
VAR_000763
I
1102
T
ATP7B_HUMAN
Disease (WD)
---
A
I
1102
T
24
UniProt
VAR_009021
C
1104
F
ATP7B_HUMAN
Disease (WD)
---
A
C
1104
F
25
UniProt
VAR_044476
C
1104
Y
ATP7B_HUMAN
Disease (WD)
---
A
C
1104
Y
26
UniProt
VAR_010017
V
1106
D
ATP7B_HUMAN
Disease (WD)
---
A
V
1106
D
27
UniProt
VAR_044477
V
1106
I
ATP7B_HUMAN
Disease (WD)
---
A
V
1106
I
28
UniProt
VAR_000764
V
1109
M
ATP7B_HUMAN
Polymorphism
---
A
V
1109
M
29
UniProt
VAR_023032
G
1111
D
ATP7B_HUMAN
Disease (WD)
182659444
A
G
1111
D
30
UniProt
VAR_000765
V
1140
A
ATP7B_HUMAN
Polymorphism
1801249
A
V
1140
A
31
UniProt
VAR_000766
Q
1142
H
ATP7B_HUMAN
Disease (WD)
---
A
Q
1142
H
32
UniProt
VAR_023033
T
1143
N
ATP7B_HUMAN
Polymorphism
---
A
T
1143
N
33
UniProt
VAR_000767
V
1146
M
ATP7B_HUMAN
Disease (WD)
---
A
V
1146
M
34
UniProt
VAR_000768
I
1148
T
ATP7B_HUMAN
Disease (WD)
60431989
A
I
1148
T
35
UniProt
VAR_058930
G
1149
A
ATP7B_HUMAN
Disease (WD)
---
A
G
1149
A
36
UniProt
VAR_009022
R
1151
H
ATP7B_HUMAN
Disease (WD)
---
A
R
1151
H
37
UniProt
VAR_000769
W
1153
C
ATP7B_HUMAN
Disease (WD)
---
A
W
1153
C
38
UniProt
VAR_010018
W
1153
R
ATP7B_HUMAN
Disease (WD)
---
A
W
1153
R
39
UniProt
VAR_058931
D
1164
N
ATP7B_HUMAN
Disease (WD)
---
A
D
1164
N
40
UniProt
VAR_023034
A
1168
S
ATP7B_HUMAN
Disease (WD)
---
A
A
1168
S
41
UniProt
VAR_009023
M
1169
T
ATP7B_HUMAN
Disease (WD)
---
A
M
1169
T
42
UniProt
VAR_000770
M
1169
V
ATP7B_HUMAN
Disease (WD)
---
A
M
1169
V
43
UniProt
VAR_058932
E
1173
G
ATP7B_HUMAN
Disease (WD)
---
A
E
1173
G
44
UniProt
VAR_009024
E
1173
K
ATP7B_HUMAN
Disease (WD)
---
A
E
1173
K
45
UniProt
VAR_044478
G
1176
E
ATP7B_HUMAN
Disease (WD)
---
A
G
1176
E
46
UniProt
VAR_010019
G
1176
R
ATP7B_HUMAN
Disease (WD)
---
A
G
1176
R
47
UniProt
VAR_000771
A
1183
G
ATP7B_HUMAN
Disease (WD)
---
A
A
1183
G
48
UniProt
VAR_000772
A
1183
T
ATP7B_HUMAN
Disease (WD)
---
A
A
1183
T
49
UniProt
VAR_000773
G
1186
C
ATP7B_HUMAN
Disease (WD)
---
A
G
1186
C
50
UniProt
VAR_000774
G
1186
S
ATP7B_HUMAN
Disease (WD)
---
A
G
1186
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
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]
Exons
(4, 4)
Info
All Exons
Exon 1.17 (A:1032-1081 (gaps))
Exon 1.18 (A:1082-1138)
Exon 1.19a (A:1138-1186)
Exon 1.20 (A:1186-1196)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.16b/1.17
2: Boundary 1.17/1.18
3: Boundary 1.18/1.19a
4: Boundary 1.19a/1.20
5: Boundary 1.20/1.21
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000242839
1
ENSE00002179667
chr13:
52585630-52585423
208
ATP7B_HUMAN
1-17
17
0
-
-
1.5b
ENST00000242839
5b
ENSE00001793840
chr13:
52549304-52548071
1234
ATP7B_HUMAN
18-429
412
0
-
-
1.6
ENST00000242839
6
ENSE00001750372
chr13:
52544885-52544628
258
ATP7B_HUMAN
429-515
87
0
-
-
1.7
ENST00000242839
7
ENSE00001626066
chr13:
52542743-52542580
164
ATP7B_HUMAN
515-569
55
0
-
-
1.8a
ENST00000242839
8a
ENSE00001663793
chr13:
52539169-52539008
162
ATP7B_HUMAN
570-623
54
0
-
-
1.9
ENST00000242839
9
ENSE00001778246
chr13:
52536049-52535973
77
ATP7B_HUMAN
624-649
26
0
-
-
1.10
ENST00000242839
10
ENSE00001797943
chr13:
52534458-52534284
175
ATP7B_HUMAN
649-707
59
0
-
-
1.11
ENST00000242839
11
ENSE00001661412
chr13:
52532680-52532447
234
ATP7B_HUMAN
708-785
78
0
-
-
1.12
ENST00000242839
12
ENSE00001780518
chr13:
52531743-52531652
92
ATP7B_HUMAN
786-816
31
0
-
-
1.13
ENST00000242839
13
ENSE00001691729
chr13:
52524535-52524408
128
ATP7B_HUMAN
816-859
44
0
-
-
1.14
ENST00000242839
14
ENSE00001628540
chr13:
52524297-52524143
155
ATP7B_HUMAN
859-910
52
0
-
-
1.15
ENST00000242839
15
ENSE00001610847
chr13:
52523932-52523798
135
ATP7B_HUMAN
911-955
45
0
-
-
1.16b
ENST00000242839
16b
ENSE00001682155
chr13:
52520614-52520420
195
ATP7B_HUMAN
956-1020
65
0
-
-
1.17
ENST00000242839
17
ENSE00001721174
chr13:
52518427-52518245
183
ATP7B_HUMAN
1021-1081
61
1
A:1032-1081 (gaps)
53
1.18
ENST00000242839
18
ENSE00001706162
chr13:
52516690-52516522
169
ATP7B_HUMAN
1082-1138
57
1
A:1082-1138
57
1.19a
ENST00000242839
19a
ENSE00001770820
chr13:
52515360-52515217
144
ATP7B_HUMAN
1138-1186
49
1
A:1138-1186
49
1.20
ENST00000242839
20
ENSE00001687534
chr13:
52513329-52513187
143
ATP7B_HUMAN
1186-1233
48
1
A:1186-1196
11
1.21
ENST00000242839
21
ENSE00001595712
chr13:
52511815-52511612
204
ATP7B_HUMAN
1234-1301
68
0
-
-
1.22
ENST00000242839
22
ENSE00001612752
chr13:
52511529-52511412
118
ATP7B_HUMAN
1302-1341
40
0
-
-
1.23
ENST00000242839
23
ENSE00001665491
chr13:
52509831-52509729
103
ATP7B_HUMAN
1341-1375
35
0
-
-
1.24b
ENST00000242839
24b
ENSE00001813320
chr13:
52509165-52506809
2357
ATP7B_HUMAN
1375-1465
91
0
-
-
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