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2AQT
Biol. Unit 2
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Asym.Unit (83 KB)
Biol.Unit 1 (52 KB)
Biol.Unit 2 (54 KB)
Biol.Unit 3 (153 KB)
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(1)
Title
:
CU/ZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q, K94Q DOUBLE MUTANT
Authors
:
M. Didonato, C. J. Kassmann, C. K. Bruns, D. E. Cabelli, Z. Cao, L. B. Tabatabai, J. S. Kroll, E. D. Getzoff
Date
:
18 Aug 05 (Deposition) - 31 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Biol. Unit 3: A,B,C (2x)
Keywords
:
Cu/Zn Superoxide Dismutase, Electrostatic Guidance, Neisseria Meningitidis, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Didonato, C. J. Kassmann, C. K. Bruns, D. E. Cabelli, Z. Cao, L. B. Tabatabai, J. S. Kroll, E. D. Getzoff
Cu/Zn Superoxide Dismutase From Neisseria Meningitidis K91Q, K94Q Double Mutant
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: COPPER (I) ION (CU1a)
1b: COPPER (I) ION (CU1b)
1c: COPPER (I) ION (CU1c)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
3a: SULFATE ION (SO4a)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
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No.
Name
Count
Type
Full Name
2
CU
-1
Ligand/Ion
COPPER (II) ION
1
CU1
2
Ligand/Ion
COPPER (I) ION
3
SO4
-1
Ligand/Ion
SULFATE ION
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC8 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS C:79 , HIS C:81 , HIS C:104 , HIS C:160
BINDING SITE FOR RESIDUE CU1 C 200
2
AC2
SOFTWARE
HIS C:104 , HIS C:113 , HIS C:122 , ASP C:125
BINDING SITE FOR RESIDUE ZN C 201
3
AC8
SOFTWARE
GLU C:73 , HIS C:133
BINDING SITE FOR RESIDUE CU C 301
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 8)
Info
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1: SOD_CU_ZN_1 (C:77-87)
2: SOD_CU_ZN_2 (C:174-185)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SOD_CU_ZN_1
PS00087
Copper/Zinc superoxide dismutase signature 1.
SODC_NEIMA
77-87
2
-
-
C:77-87
SODC_NEIMB
77-87
2
-
-
C:77-87
2
SOD_CU_ZN_2
PS00332
Copper/Zinc superoxide dismutase signature 2.
SODC_NEIMA
174-185
2
-
-
C:174-185
SODC_NEIMB
174-185
2
-
-
C:174-185
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2aqta_ (A:)
1b: SCOP_d2aqtb_ (B:)
1c: SCOP_d2aqtc_ (C:)
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)
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(
)
Organisms
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Cu,Zn superoxide dismutase-like
(165)
Family
:
Cu,Zn superoxide dismutase-like
(158)
Protein domain
:
Cu,Zn superoxide dismutase, SOD
(134)
Neisseria meningitidis [TaxId: 487]
(6)
1a
d2aqta_
A:
1b
d2aqtb_
B:
1c
d2aqtc_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_2aqtA00 (A:32-186)
1b: CATH_2aqtB00 (B:32-186)
1c: CATH_2aqtC00 (C:32-186)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.200, no name defined]
(125)
Neisseria meningitidis. Organism_taxid: 487.
(6)
1a
2aqtA00
A:32-186
1b
2aqtB00
B:32-186
1c
2aqtC00
C:32-186
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Pfam Domains
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Asym.Unit (83 KB)
Header - Asym.Unit
Biol.Unit 1 (52 KB)
Header - Biol.Unit 1
Biol.Unit 2 (54 KB)
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Biol.Unit 3 (153 KB)
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