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2AQR
Biol. Unit 2
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Asym.Unit (85 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 2 (54 KB)
Biol.Unit 3 (157 KB)
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(1)
Title
:
CU/ZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q MUTANT
Authors
:
M. Didonato, C. J. Kassmann, C. K. Bruns, D. E. Cabelli, Z. Cao, L. B. Tabatabai, J. S. Kroll, E. D. Getzoff
Date
:
18 Aug 05 (Deposition) - 31 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Biol. Unit 3: A,B,C (2x)
Keywords
:
Cu/Zn Superoxide Dismutase, Electrostatic Guidance, Neisseria Meningitidis, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Didonato, C. J. Kassmann, C. K. Bruns, D. E. Cabelli, Z. Cao, L. B. Tabatabai, J. S. Kroll, E. D. Getzoff
Cu/Zn Superoxide Dismutase From Neisseria Meningitidis K91Q Mutant
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: COPPER (I) ION (CU1a)
1b: COPPER (I) ION (CU1b)
1c: COPPER (I) ION (CU1c)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
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Label:
No.
Name
Count
Type
Full Name
2
CU
-1
Ligand/Ion
COPPER (II) ION
1
CU1
2
Ligand/Ion
COPPER (I) ION
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
HIS C:79 , HIS C:81 , HIS C:104 , HIS C:160
BINDING SITE FOR RESIDUE CU1 C 200
2
AC5
SOFTWARE
GLU C:73 , HIS C:133
BINDING SITE FOR RESIDUE CU C 251
3
AC8
SOFTWARE
HIS C:104 , HIS C:113 , HIS C:122 , ASP C:125
BINDING SITE FOR RESIDUE ZN C 201
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: SOD_CU_ZN_1 (C:77-87)
2: SOD_CU_ZN_2 (C:174-185)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SOD_CU_ZN_1
PS00087
Copper/Zinc superoxide dismutase signature 1.
SODC_NEIMB
77-87
2
-
-
C:77-87
2
SOD_CU_ZN_2
PS00332
Copper/Zinc superoxide dismutase signature 2.
SODC_NEIMB
174-185
2
-
-
C:174-185
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Exons
(0, 0)
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2aqra_ (A:)
1b: SCOP_d2aqrc_ (C:)
1c: SCOP_d2aqrb_ (B:)
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Cu,Zn superoxide dismutase-like
(165)
Family
:
Cu,Zn superoxide dismutase-like
(158)
Protein domain
:
Cu,Zn superoxide dismutase, SOD
(134)
Neisseria meningitidis [TaxId: 487]
(6)
1a
d2aqra_
A:
1b
d2aqrc_
C:
1c
d2aqrb_
B:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_2aqrA00 (A:32-186)
1b: CATH_2aqrB00 (B:32-186)
1c: CATH_2aqrC00 (C:32-186)
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Organisms
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(
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.200, no name defined]
(125)
Neisseria meningitidis. Organism_taxid: 487.
(6)
1a
2aqrA00
A:32-186
1b
2aqrB00
B:32-186
1c
2aqrC00
C:32-186
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Pfam Domains
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Asym.Unit (85 KB)
Header - Asym.Unit
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Biol.Unit 3 (157 KB)
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