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2AN3
Biol. Unit 2
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Asym.Unit (97 KB)
Biol.Unit 1 (47 KB)
Biol.Unit 2 (49 KB)
Biol.Unit 3 (93 KB)
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(1)
Title
:
STRUCTURE OF PNMT WITH S-ADENOSYL-L-HOMOCYSTEINE AND THE SEMI-RIGID ANALOGUE ACCEPTOR SUBSTRATE CIS-(1R,2S)-2-AMINO-1-TETRALOL.
Authors
:
C. L. Gee, J. D. A. Tyndall, G. L. Grunewald, Q. Wu, M. J. Mcleish, J. L. Mar
Date
:
11 Aug 05 (Deposition) - 14 Mar 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Methyltransferase, Substrate Structure, S-Adenosyl-L-Methionine, Adrenaline Synthesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. L. Gee, J. D. A. Tyndall, G. L. Grunewald, Q. Wu, M. J. Mcleish, J. L. Martin
Mode Of Binding Of Methyl Acceptor Substrates To The Adrenaline-Synthesizing Enzyme Phenylethanolamine N-Methyltransferase: Implications For Catalysis
Biochemistry V. 44 16875 2005
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CIS-(1R,2S)-2-AMINO-1,2,3,4-TETRAH... (CTLa)
1b: CIS-(1R,2S)-2-AMINO-1,2,3,4-TETRAH... (CTLb)
2a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
2b: S-ADENOSYL-L-HOMOCYSTEINE (SAHb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CTL
1
Ligand/Ion
CIS-(1R,2S)-2-AMINO-1,2,3,4-TETRAHYDRONAPHTHALEN-1-OL
2
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
TYR B:527 , TYR B:535 , TYR B:540 , GLY B:579 , SER B:580 , GLY B:581 , THR B:583 , TYR B:585 , ASP B:601 , PHE B:602 , LEU B:603 , ASN B:606 , ILE B:657 , ASP B:658 , VAL B:659 , HIS B:660 , ALA B:681 , PHE B:682 , CYS B:683 , VAL B:687 , HOH B:1053 , HOH B:1071
BINDING SITE FOR RESIDUE SAH B 2002
2
AC4
SOFTWARE
TYR B:535 , ASN B:539 , ARG B:544 , PHE B:682 , GLU B:719 , TYR B:722 , MET B:758 , ASP B:767 , HOH B:1014 , HOH B:1058 , HOH B:1071
BINDING SITE FOR RESIDUE CTL B 3002
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SAPs(SNPs)/Variants
(8, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_036829 (T598A, chain A/B, )
2: VAR_036830 (R612C, chain A/B, )
3: VAR_036831 (A675T, chain A/B, )
4: VAR_037611 (S688C, chain A/B, )
5: VAR_037612 (L711H, chain A/B, )
6: VAR_037613 (L717Q, chain A/B, )
7: VAR_037614 (R754H, chain A/B, )
8: VAR_024547 (W776R, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036829
T
98
A
PNMT_HUMAN
Polymorphism
36060376
A
B
T
98
598
A
2
UniProt
VAR_036830
R
112
C
PNMT_HUMAN
Polymorphism
34530498
A
B
R
112
612
C
3
UniProt
VAR_036831
A
175
T
PNMT_HUMAN
Polymorphism
34341496
A
B
A
175
675
T
4
UniProt
VAR_037611
S
188
C
PNMT_HUMAN
Polymorphism
5639
A
B
S
188
688
C
5
UniProt
VAR_037612
L
211
H
PNMT_HUMAN
Polymorphism
5640
A
B
L
211
711
H
6
UniProt
VAR_037613
L
217
Q
PNMT_HUMAN
Polymorphism
5641
A
B
L
217
717
Q
7
UniProt
VAR_037614
R
254
H
PNMT_HUMAN
Polymorphism
5642
A
B
R
254
754
H
8
UniProt
VAR_024547
W
276
R
PNMT_HUMAN
Polymorphism
5643
A
B
W
276
776
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: SAM_MT_NNMT_PNMT_TEMT (B:523-781)
2: NNMT_PNMT_TEMT (B:575-591)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SAM_MT_NNMT_PNMT_TEMT
PS51681
SAM-dependent methyltransferase NNMT/PNMT/TEMT-type profile.
PNMT_HUMAN
23-282
1
-
B:523-781
2
NNMT_PNMT_TEMT
PS01100
NNMT/PNMT/TEMT family of methyltransferases signature.
PNMT_HUMAN
75-91
1
-
B:575-591
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2an3a_ (A:)
1b: SCOP_d2an3b_ (B:)
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
Arylamine N-methyltransferase
(40)
Protein domain
:
Phenylethanolamine N-methyltransferase, PNMTase
(8)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d2an3a_
A:
1b
d2an3b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2an3A00 (A:23-280)
1b: CATH_2an3B00 (B:513-781)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Vaccinia Virus protein VP39
(378)
Human (Homo sapiens)
(49)
1a
2an3A00
A:23-280
1b
2an3B00
B:513-781
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Asym.Unit (97 KB)
Header - Asym.Unit
Biol.Unit 1 (47 KB)
Header - Biol.Unit 1
Biol.Unit 2 (49 KB)
Header - Biol.Unit 2
Biol.Unit 3 (93 KB)
Header - Biol.Unit 3
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